RNA–Protein interactions for RNA: ENST00000587457.1

PPP6R1-204, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 2

Gene PPP6R1, Length 2,389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-204ENST00000587457 TPSB2P20231 275 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 MAP4P27816 1152 aaKnown RBP16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 ADSLP30566 484 aaPredicted RBP16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 RPL14P50914 215 aaKnown RBP16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 RALGDSQ12967 914 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 TPSAB1Q15661 275 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 PHKG1Q16816 387 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 ANKFN1Q8N957 763 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 HPS1Q92902 700 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 ATXN7L3BQ96GX2 97 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 GAD1Q99259 594 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 FAM105AQ9NUU6 356 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 TXNDC16Q9P2K2 825 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 VPS51Q9UID3 782 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 KCNU1A8MYU2 1149 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 CLDN5O00501 218 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 DLGAP1O14490 977 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 APOL1O14791 398 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 PFDN6O15212 129 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 NOL3O60936 208 aaKnown RBP16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 TFEBP19484 476 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 CCNA2P20248 432 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 IL4RP24394 825 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 RCVRNP35243 200 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 ATXN1P54253 815 aaKnown RBP16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 NME5P56597 212 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 CACNB2Q08289 660 aaPredicted RBP16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 NEDD8Q15843 81 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 WSCD1Q658N2 575 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 LIMS2Q7Z4I7 341 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 EFHD1Q9BUP0 239 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 C1orf50Q9BV19 199 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 SFMBT1Q9UHJ3 866 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 CDYLQ9Y232 598 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 RAP2CQ9Y3L5 183 aa16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 COPG1Q9Y678 874 aaKnown RBP16.05■□□□□ 0.16
PPP6R1-204ENST00000587457 TCRBV3S1A0A5B6 114 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 SEPT4O43236 478 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 CLIC3O95833 236 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 ERVK-10P10266 1014 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 CCND3P30281 292 aaPredicted RBP16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 LRPAP1P30533 357 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 GSSP48637 474 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 MERTKQ12866 999 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 OXA1LQ15070 435 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 CA9Q16790 459 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 FAM117BQ6P1L5 589 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 GK5Q6ZS86 529 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 CADM3Q8N126 398 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 CBR4Q8N4T8 237 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 DCLK2Q8N568 766 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 B3GALNT2Q8NCR0 500 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 FAM110BQ8TC76 370 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 SREK1Q8WXA9 508 aaKnown RBP16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 NSMCE3Q96MG7 304 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 TSPAN18Q96SJ8 248 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 ADI1Q9BV57 179 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 NACA2Q9H009 215 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 UPF3AQ9H1J1 476 aaKnown RBP16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 AGO3Q9H9G7 860 aaKnown RBP16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 TRPV5Q9NQA5 729 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 MIOSQ9NXC5 875 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 CPQQ9Y646 472 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 PIGNO95427 931 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 BCL10O95999 233 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 JUNP05412 331 aaKnown RBP16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 ASGR1P07306 291 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 F7P08709 466 aaPredicted RBP16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 GRIA3P42263 894 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 SESN2P58004 480 aaPredicted RBP16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 PDK2Q15119 407 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 INAQ16352 499 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 SERINC5Q86VE9 423 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 NDRG1Q92597 394 aaKnown RBP16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 TOP1MTQ969P6 601 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 TCF12Q99081 682 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 SNRNP25Q9BV90 132 aaKnown RBP16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 UNKQ9C0B0 810 aaKnown RBP16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 MUC3BQ9H195 1237 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 ZDHHC2Q9UIJ5 367 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 NOX1Q9Y5S8 564 aa16.04■□□□□ 0.16
PPP6R1-204ENST00000587457 PRORSD1PA6NEY8 169 aa16.03■□□□□ 0.16
PPP6R1-204ENST00000587457 ZNF839A8K0R7 811 aa16.03■□□□□ 0.16
PPP6R1-204ENST00000587457 NRP1O14786 923 aa16.03■□□□□ 0.16
PPP6R1-204ENST00000587457 ADAMTS4O75173 837 aa16.03■□□□□ 0.16
PPP6R1-204ENST00000587457 BMP2P12643 396 aa16.03■□□□□ 0.16
PPP6R1-204ENST00000587457 MATN1P21941 496 aa16.03■□□□□ 0.16
PPP6R1-204ENST00000587457 TGM2P21980 687 aa16.03■□□□□ 0.16
PPP6R1-204ENST00000587457 WARSP23381 471 aaKnown RBP16.03■□□□□ 0.16
PPP6R1-204ENST00000587457 GARSP41250 739 aaKnown RBP16.03■□□□□ 0.16
PPP6R1-204ENST00000587457 MLLT10P55197 1068 aa16.03■□□□□ 0.16
PPP6R1-204ENST00000587457 SNX16P57768 344 aa16.03■□□□□ 0.16
PPP6R1-204ENST00000587457 IRF9Q00978 393 aa16.03■□□□□ 0.16
PPP6R1-204ENST00000587457 CES3Q6UWW8 571 aa16.03■□□□□ 0.16
PPP6R1-204ENST00000587457 ZDHHC17Q8IUH5 632 aa16.03■□□□□ 0.16
PPP6R1-204ENST00000587457 TOP6BLQ8N6T0 577 aa16.03■□□□□ 0.16
PPP6R1-204ENST00000587457 PCDH19Q8TAB3 1148 aa16.03■□□□□ 0.16
PPP6R1-204ENST00000587457 PBXIP1Q96AQ6 731 aa16.03■□□□□ 0.16
PPP6R1-204ENST00000587457 TNIP3Q96KP6 325 aa16.03■□□□□ 0.16
PPP6R1-204ENST00000587457 ALPK1Q96QP1 1244 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms