RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 LRP3O75074 770 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 FGGP02679 453 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 CTPS1P17812 591 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 NFKB1P19838 968 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 TGM1P22735 817 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 CD68P34810 354 aaPredicted RBP21.59■■□□□ 1.05
RETREG3-204ENST00000586796 SUOXP51687 545 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 GNG11P61952 73 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 IRX4P78413 519 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 PCSK7Q16549 785 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 ZNF284Q2VY69 593 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 SETMARQ53H47 684 aaPredicted RBP21.59■■□□□ 1.05
RETREG3-204ENST00000586796 LAYNQ6UX15 382 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 KDELC2Q7Z4H8 507 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 CEP76Q8TAP6 659 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 C1orf54Q8WWF1 131 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 IMP4Q96G21 291 aaKnown RBP21.59■■□□□ 1.05
RETREG3-204ENST00000586796 VAT1Q99536 393 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 TDRD1Q9BXT4 1180 aaKnown RBP21.59■■□□□ 1.05
RETREG3-204ENST00000586796 TM9SF3Q9HD45 589 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 FZD3Q9NPG1 666 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 DNPEPQ9ULA0 475 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 PHTF1Q9UMS5 762 aa21.59■■□□□ 1.05
RETREG3-204ENST00000586796 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.59■■□□□ 1.05
RETREG3-204ENST00000586796 TNRC6BQ9UPQ9 1833 aaKnown RBP21.59■■□□□ 1.05
RETREG3-204ENST00000586796 A0A1W2PQ67 120 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 C10orf142B7Z368 130 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 WNT9AO14904 365 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 STK10O94804 968 aaKnown RBP21.58■■□□□ 1.05
RETREG3-204ENST00000586796 PAK4O96013 591 aaPredicted RBP21.58■■□□□ 1.05
RETREG3-204ENST00000586796 MT-CYBP00156 380 aaPredicted RBP21.58■■□□□ 1.05
RETREG3-204ENST00000586796 CA4P22748 312 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 HOXD12P35452 270 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 CSNK1EP49674 416 aaKnown RBP21.58■■□□□ 1.05
RETREG3-204ENST00000586796 EPHB1P54762 984 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 SGCGQ13326 291 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 SNX1Q13596 522 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 PTPRRQ15256 657 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 LONRF2Q1L5Z9 754 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 TMEM52BQ4KMG9 183 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 TMEM259Q4ZIN3 620 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 PRR23CQ6ZRP0 262 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 RABEPKQ7Z6M1 372 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 LPCAT1Q8NF37 534 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 C1orf216Q8TAB5 229 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 NUSAP1Q9BXS6 441 aaKnown RBP21.58■■□□□ 1.05
RETREG3-204ENST00000586796 SLC17A9Q9BYT1 436 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 PCDH9Q9HC56 1237 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 RSPH14Q9UHP6 348 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 TRHDEQ9UKU6 1024 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 TPX2Q9ULW0 747 aaKnown RBP21.58■■□□□ 1.05
RETREG3-204ENST00000586796 SLC6A14Q9UN76 642 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 CA5BQ9Y2D0 317 aa21.58■■□□□ 1.05
RETREG3-204ENST00000586796 ANKRD36A6QL64 1941 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 GOLGA8CPA6NN73 597 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 PRR5-ARHGAP8B1AHC4 643 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 FZD6O60353 706 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 PMPCBO75439 489 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 ALPIP09923 528 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 MMP12P39900 470 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 LIG3P49916 1009 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 FGL2Q14314 439 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 AASDHQ4L235 1098 aaPredicted RBP21.57■■□□□ 1.04
RETREG3-204ENST00000586796 SLC23A3Q6PIS1 610 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 FAM71DQ8N9W8 422 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 SLC35B2Q8TB61 432 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 CCDC110Q8TBZ0 833 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 PIH1D2Q8WWB5 315 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 MS4A14Q96JA4 679 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 SMIM14Q96QK8 99 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 TMEM121Q9BTD3 319 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 USP29Q9HBJ7 922 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 B4GALT6Q9UBX8 382 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 DMTF1Q9Y222 760 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 COQ6Q9Y2Z9 468 aa21.57■■□□□ 1.04
RETREG3-204ENST00000586796 GPR179Q6PRD1 2367 aa21.56■■□□□ 1.04
RETREG3-204ENST00000586796 ZFHX2Q9C0A1 2572 aaPredicted RBP21.56■■□□□ 1.04
RETREG3-204ENST00000586796 TM7SF2O76062 418 aa21.56■■□□□ 1.04
RETREG3-204ENST00000586796 AFF3P51826 1226 aaKnown RBP21.56■■□□□ 1.04
RETREG3-204ENST00000586796 RACK1P63244 317 aaKnown RBP21.56■■□□□ 1.04
RETREG3-204ENST00000586796 STAT4Q14765 748 aa21.56■■□□□ 1.04
RETREG3-204ENST00000586796 TEAD4Q15561 434 aa21.56■■□□□ 1.04
RETREG3-204ENST00000586796 ANKRD20A2Q5SQ80 823 aa21.56■■□□□ 1.04
RETREG3-204ENST00000586796 ANKRD20A1Q5TYW2 823 aa21.56■■□□□ 1.04
RETREG3-204ENST00000586796 ANKRD20A3Q5VUR7 823 aa21.56■■□□□ 1.04
RETREG3-204ENST00000586796 DENND2CQ68D51 928 aa21.56■■□□□ 1.04
RETREG3-204ENST00000586796 NAPEPLDQ6IQ20 393 aa21.56■■□□□ 1.04
RETREG3-204ENST00000586796 NDUFAF2Q8N183 169 aa21.56■■□□□ 1.04
RETREG3-204ENST00000586796 GPR161Q8N6U8 529 aaKnown RBP21.56■■□□□ 1.04
RETREG3-204ENST00000586796 PBKQ96KB5 322 aa21.56■■□□□ 1.04
RETREG3-204ENST00000586796 A0A1B0GVT2 93 aa21.55■■□□□ 1.04
RETREG3-204ENST00000586796 PRAMEF26H0Y7S4 382 aa21.55■■□□□ 1.04
RETREG3-204ENST00000586796 LIASO43766 372 aa21.55■■□□□ 1.04
RETREG3-204ENST00000586796 LZTS3O60299 673 aaPredicted RBP21.55■■□□□ 1.04
RETREG3-204ENST00000586796 PRLP01236 227 aa21.55■■□□□ 1.04
RETREG3-204ENST00000586796 C6P13671 934 aa21.55■■□□□ 1.04
RETREG3-204ENST00000586796 HNRNPA2B1P22626 353 aaKnown RBP21.55■■□□□ 1.04
RETREG3-204ENST00000586796 NFKBIAP25963 317 aa21.55■■□□□ 1.04
RETREG3-204ENST00000586796 AKT2P31751 481 aa21.55■■□□□ 1.04
RETREG3-204ENST00000586796 NUDT1P36639 197 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms