RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 GRIN3AQ8TCU5 1115 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 STAMBPL1Q96FJ0 436 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 TTC25Q96NG3 672 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 MCCC1Q96RQ3 725 aaPredicted RBP16.24■□□□□ 0.19
SS18-226ENST00000585241 SRPK1Q96SB4 655 aaKnown RBP16.24■□□□□ 0.19
SS18-226ENST00000585241 NELL2Q99435 816 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 KIFC1Q9BW19 673 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 RSPH9Q9H1X1 276 aaPredicted RBP16.24■□□□□ 0.19
SS18-226ENST00000585241 EPB41L4BQ9H329 900 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 ARFGAP3Q9NP61 516 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 CD320Q9NPF0 282 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 NINJ2Q9NZG7 142 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 PHTF1Q9UMS5 762 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 SOX13Q9UN79 622 aa16.24■□□□□ 0.19
SS18-226ENST00000585241 A0A0J9YYE9 177 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 A0A1W2PQF6 199 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 KANSL1LA0AUZ9 987 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 MAGEB16A2A368 324 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 CHURC1-FNTBB4DL54 471 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 KLF8O95600 359 aaPredicted RBP16.23■□□□□ 0.19
SS18-226ENST00000585241 TTC4O95801 387 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 TRBC1P01850 177 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 GSTA2P09210 222 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 TPH1P17752 444 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 CD72P21854 359 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 ADRA1DP25100 572 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 PSMA3P25788 255 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 ITGB7P26010 798 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 FZD5Q13467 585 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 MTM1Q13496 603 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 LRRC32Q14392 662 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 UAP1Q16222 522 aaPredicted RBP16.23■□□□□ 0.19
SS18-226ENST00000585241 C2orf27AQ580R0 203 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 EOGTQ5NDL2 527 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 STEAP4Q687X5 459 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 SDE2Q6IQ49 451 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 TMEM135Q86UB9 458 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 TXNDC5Q8NBS9 432 aaKnown RBP16.23■□□□□ 0.19
SS18-226ENST00000585241 OR2T3Q8NH03 318 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 PIP4K2CQ8TBX8 421 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 PYROXD1Q8WU10 500 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 PDCD6IPQ8WUM4 868 aaKnown RBP16.23■□□□□ 0.19
SS18-226ENST00000585241 PEX13Q92968 403 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 RMDN1Q96DB5 314 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 C9orf72Q96LT7 481 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 KLHL32Q96NJ5 620 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 FUT8Q9BYC5 575 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 PABPC3Q9H361 631 aaKnown RBP16.23■□□□□ 0.19
SS18-226ENST00000585241 SEMA4AQ9H3S1 761 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 PLAC1Q9HBJ0 212 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 MAGEE1Q9HCI5 957 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 HACD3Q9P035 362 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 FBXL21Q9UKT6 434 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 SARDHQ9UL12 918 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 RIMKLBQ9ULI2 386 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 MMP17Q9ULZ9 603 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 NDRG2Q9UN36 371 aaKnown RBP16.23■□□□□ 0.19
SS18-226ENST00000585241 CHMP2BQ9UQN3 213 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 TCAF1Q9Y4C2 921 aa16.23■□□□□ 0.19
SS18-226ENST00000585241 MYLKQ15746 1914 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 FAM237BA0A1B0GVD1 139 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 HEATR9A2RTY3 570 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 MROH6A6NGR9 719 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 CAPN8A6NHC0 703 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 C1QTNF3-AMACRE9PGA6 284 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 RIPK2O43353 540 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 SPAG6O75602 509 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 PAPSS2O95340 614 aaPredicted RBP16.22■□□□□ 0.19
SS18-226ENST00000585241 ABHD2P08910 425 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 HOXB2P14652 356 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 PGAM1P18669 254 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 WASP42768 502 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 COPAP53621 1224 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 CRADDP78560 199 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 LAMB3Q13751 1172 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 FRG1Q14331 258 aaKnown RBP16.22■□□□□ 0.19
SS18-226ENST00000585241 STARD3Q14849 445 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 KIAA1211LQ6NV74 962 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 PKN3Q6P5Z2 889 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 RPLP0P6Q8NHW5 317 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 BRSK1Q8TDC3 778 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 SCRN2Q96FV2 425 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 C19orf43Q9BQ61 176 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 OSBPL6Q9BZF3 934 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 TRABDQ9H4I3 376 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 LRRC4CQ9HCJ2 640 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 MUTYHQ9UIF7 546 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 SPO11Q9Y5K1 396 aa16.22■□□□□ 0.19
SS18-226ENST00000585241 UPK3BL1B0FP48 263 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 UPK3BL2E5RIL1 263 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 LDB2O43679 373 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 SYNCRIPO60506 623 aaKnown RBP16.21■□□□□ 0.19
SS18-226ENST00000585241 USP1O94782 785 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 COL9A1P20849 921 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 SLC8A1P32418 973 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 HSD17B3P37058 310 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 SUOXP51687 545 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 EPHB1P54762 984 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 GPX6P59796 221 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 POLR2LP62875 67 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms