RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 PLD5Q8N7P1 536 aa27.36■■□□□ 1.97
SMARCD2-210ENST00000584400 SPC24Q8NBT2 197 aa27.36■■□□□ 1.97
SMARCD2-210ENST00000584400 CENPTQ96BT3 561 aa27.36■■□□□ 1.97
SMARCD2-210ENST00000584400 BRD8Q9H0E9 1235 aa27.36■■□□□ 1.97
SMARCD2-210ENST00000584400 RBM22Q9NW64 420 aaKnown RBP eCLIP27.36■■□□□ 1.97
SMARCD2-210ENST00000584400 APOBEC2Q9Y235 224 aaKnown RBP27.36■■□□□ 1.97
SMARCD2-210ENST00000584400 HEY1Q9Y5J3 304 aa27.36■■□□□ 1.97
SMARCD2-210ENST00000584400 RAD51BO15315 384 aa27.35■■□□□ 1.97
SMARCD2-210ENST00000584400 HTRA2O43464 458 aaPredicted RBP27.35■■□□□ 1.97
SMARCD2-210ENST00000584400 LZTS3O60299 673 aaPredicted RBP27.35■■□□□ 1.97
SMARCD2-210ENST00000584400 KRT10P13645 584 aa27.35■■□□□ 1.97
SMARCD2-210ENST00000584400 MMP12P39900 470 aa27.35■■□□□ 1.97
SMARCD2-210ENST00000584400 VAV2P52735 878 aa27.35■■□□□ 1.97
SMARCD2-210ENST00000584400 PTK2BQ14289 1009 aa27.35■■□□□ 1.97
SMARCD2-210ENST00000584400 PDK1Q15118 436 aa27.35■■□□□ 1.97
SMARCD2-210ENST00000584400 SHBQ15464 509 aa27.35■■□□□ 1.97
SMARCD2-210ENST00000584400 RAD9BQ6WBX8 426 aa27.35■■□□□ 1.97
SMARCD2-210ENST00000584400 KIAA1328Q86T90 577 aa27.35■■□□□ 1.97
SMARCD2-210ENST00000584400 ZSWIM9Q86XI8 627 aa27.35■■□□□ 1.97
SMARCD2-210ENST00000584400 BAHD1Q8TBE0 780 aaPredicted RBP27.35■■□□□ 1.97
SMARCD2-210ENST00000584400 PDCD6IPQ8WUM4 868 aaKnown RBP27.35■■□□□ 1.97
SMARCD2-210ENST00000584400 ANGPTL2Q9UKU9 493 aa27.35■■□□□ 1.97
SMARCD2-210ENST00000584400 PHTF1Q9UMS5 762 aa27.35■■□□□ 1.97
SMARCD2-210ENST00000584400 PCDHGC4Q9Y5F7 938 aa27.35■■□□□ 1.97
SMARCD2-210ENST00000584400 POM121BA6NF01 834 aa27.34■■□□□ 1.97
SMARCD2-210ENST00000584400 PPP1R12AO14974 1030 aaPredicted RBP27.34■■□□□ 1.97
SMARCD2-210ENST00000584400 ZRANB2O95218 330 aaKnown RBP eCLIP27.34■■□□□ 1.97
SMARCD2-210ENST00000584400 C6P13671 934 aa27.34■■□□□ 1.97
SMARCD2-210ENST00000584400 CA4P22748 312 aa27.34■■□□□ 1.97
SMARCD2-210ENST00000584400 LIG3P49916 1009 aa27.34■■□□□ 1.97
SMARCD2-210ENST00000584400 YPEL5P62699 121 aa27.34■■□□□ 1.97
SMARCD2-210ENST00000584400 PPIDQ08752 370 aaKnown RBP27.34■■□□□ 1.97
SMARCD2-210ENST00000584400 LRRC14Q15048 493 aa27.34■■□□□ 1.97
SMARCD2-210ENST00000584400 GATAD2AQ86YP4 633 aa27.34■■□□□ 1.97
SMARCD2-210ENST00000584400 RCOR2Q8IZ40 523 aa27.34■■□□□ 1.97
SMARCD2-210ENST00000584400 TPCN2Q8NHX9 752 aa27.34■■□□□ 1.97
SMARCD2-210ENST00000584400 SEMA3CQ99985 751 aa27.34■■□□□ 1.97
SMARCD2-210ENST00000584400 GPR27Q9NS67 375 aa27.34■■□□□ 1.97
SMARCD2-210ENST00000584400 TFR2Q9UP52 801 aa27.34■■□□□ 1.97
SMARCD2-210ENST00000584400 CPP00450 1065 aa27.33■■□□□ 1.97
SMARCD2-210ENST00000584400 NR2C2P49116 596 aa27.33■■□□□ 1.97
SMARCD2-210ENST00000584400 THOP1P52888 689 aa27.33■■□□□ 1.97
SMARCD2-210ENST00000584400 PFN3P60673 137 aa27.33■■□□□ 1.97
SMARCD2-210ENST00000584400 SLC10A2Q12908 348 aaPredicted RBP27.33■■□□□ 1.97
SMARCD2-210ENST00000584400 AGERQ15109 404 aa27.33■■□□□ 1.97
SMARCD2-210ENST00000584400 ARMC12Q5T9G4 340 aa27.33■■□□□ 1.97
SMARCD2-210ENST00000584400 ALG1LQ6GMV1 187 aa27.33■■□□□ 1.97
SMARCD2-210ENST00000584400 MFSD7Q6UXD7 560 aa27.33■■□□□ 1.97
SMARCD2-210ENST00000584400 DPPA4Q7L190 304 aa27.33■■□□□ 1.97
SMARCD2-210ENST00000584400 KATNAL2Q8IYT4 538 aa27.33■■□□□ 1.97
SMARCD2-210ENST00000584400 RBM41Q96IZ5 413 aaKnown RBP27.33■■□□□ 1.97
SMARCD2-210ENST00000584400 FTSJ1Q9UET6 329 aa27.33■■□□□ 1.97
SMARCD2-210ENST00000584400 BTBD3Q9Y2F9 522 aa27.33■■□□□ 1.97
SMARCD2-210ENST00000584400 TTLL3Q9Y4R7 772 aa27.33■■□□□ 1.97
SMARCD2-210ENST00000584400 ASCC3Q8N3C0 2202 aaKnown RBP27.32■■□□□ 1.96
SMARCD2-210ENST00000584400 SPTY2D1-AS1A0A0U1RR47 76 aa27.32■■□□□ 1.96
SMARCD2-210ENST00000584400 TTC24A2A3L6 582 aaPredicted RBP27.32■■□□□ 1.96
SMARCD2-210ENST00000584400 TNFSF14O43557 240 aa27.32■■□□□ 1.96
SMARCD2-210ENST00000584400 ELFN1P0C7U0 828 aa27.32■■□□□ 1.96
SMARCD2-210ENST00000584400 CYP2A6P11509 494 aaPredicted RBP27.32■■□□□ 1.96
SMARCD2-210ENST00000584400 CDKN2BP42772 138 aa27.32■■□□□ 1.96
SMARCD2-210ENST00000584400 GSDMDP57764 484 aa27.32■■□□□ 1.96
SMARCD2-210ENST00000584400 SHC2P98077 582 aa27.32■■□□□ 1.96
SMARCD2-210ENST00000584400 FOXC1Q12948 553 aa27.32■■□□□ 1.96
SMARCD2-210ENST00000584400 PDE1CQ14123 709 aaPredicted RBP27.32■■□□□ 1.96
SMARCD2-210ENST00000584400 HS1BP3Q53T59 392 aa27.32■■□□□ 1.96
SMARCD2-210ENST00000584400 TFDP3Q5H9I0 405 aa27.32■■□□□ 1.96
SMARCD2-210ENST00000584400 PARGQ86W56 976 aa27.32■■□□□ 1.96
SMARCD2-210ENST00000584400 SLC22A18ASQ8N1D0 253 aa27.32■■□□□ 1.96
SMARCD2-210ENST00000584400 TP53I13Q8NBR0 393 aaPredicted RBP27.32■■□□□ 1.96
SMARCD2-210ENST00000584400 KCTD5Q9NXV2 234 aa27.32■■□□□ 1.96
SMARCD2-210ENST00000584400 H3BM21 787 aa27.31■■□□□ 1.96
SMARCD2-210ENST00000584400 PJA2O43164 708 aa27.31■■□□□ 1.96
SMARCD2-210ENST00000584400 PGLSO95336 258 aa27.31■■□□□ 1.96
SMARCD2-210ENST00000584400 PRKCGP05129 697 aa27.31■■□□□ 1.96
SMARCD2-210ENST00000584400 HNRNPKP61978 463 aaKnown RBP eCLIP27.31■■□□□ 1.96
SMARCD2-210ENST00000584400 AP1B1Q10567 949 aa27.31■■□□□ 1.96
SMARCD2-210ENST00000584400 KIF5AQ12840 1032 aa27.31■■□□□ 1.96
SMARCD2-210ENST00000584400 BNIP3Q12983 259 aa27.31■■□□□ 1.96
SMARCD2-210ENST00000584400 CCDC50Q8IVM0 306 aa27.31■■□□□ 1.96
SMARCD2-210ENST00000584400 EXD1Q8NHP7 514 aa27.31■■□□□ 1.96
SMARCD2-210ENST00000584400 LGMNQ99538 433 aa27.31■■□□□ 1.96
SMARCD2-210ENST00000584400 GOLPH3Q9H4A6 298 aa27.31■■□□□ 1.96
SMARCD2-210ENST00000584400 REXO2Q9Y3B8 237 aaKnown RBP27.31■■□□□ 1.96
SMARCD2-210ENST00000584400 RAI2Q9Y5P3 530 aa27.31■■□□□ 1.96
SMARCD2-210ENST00000584400 RCCD1A6NED2 376 aa27.3■■□□□ 1.96
SMARCD2-210ENST00000584400 FTH1P19P0C7X4 201 aa27.3■■□□□ 1.96
SMARCD2-210ENST00000584400 TGM2P21980 687 aa27.3■■□□□ 1.96
SMARCD2-210ENST00000584400 DYNLT1P63172 113 aa27.3■■□□□ 1.96
SMARCD2-210ENST00000584400 IFI35P80217 286 aaPredicted RBP27.3■■□□□ 1.96
SMARCD2-210ENST00000584400 TRAF2Q12933 501 aa27.3■■□□□ 1.96
SMARCD2-210ENST00000584400 TAZQ16635 292 aa27.3■■□□□ 1.96
SMARCD2-210ENST00000584400 SPOCD1Q6ZMY3 1216 aa27.3■■□□□ 1.96
SMARCD2-210ENST00000584400 USP45Q70EL2 814 aa27.3■■□□□ 1.96
SMARCD2-210ENST00000584400 ACRBPQ8NEB7 543 aa27.3■■□□□ 1.96
SMARCD2-210ENST00000584400 KIAA1524Q8TCG1 905 aa27.3■■□□□ 1.96
SMARCD2-210ENST00000584400 NSMCE3Q96MG7 304 aa27.3■■□□□ 1.96
SMARCD2-210ENST00000584400 OLFM3Q96PB7 478 aa27.3■■□□□ 1.96
SMARCD2-210ENST00000584400 DNAJC28Q9NX36 388 aa27.3■■□□□ 1.96
SMARCD2-210ENST00000584400 COQ6Q9Y2Z9 468 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms