RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 SEMA4AQ9H3S1 761 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 C10orf88Q9H8K7 445 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 GLOD4Q9HC38 313 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 EPB41L5Q9HCM4 733 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 ASIC3Q9UHC3 531 aa15.64■□□□□ 0.09
SS18-216ENST00000580751 MBD1Q9UIS9 605 aaPredicted RBP15.64■□□□□ 0.09
SS18-216ENST00000580751 VPS13AQ96RL7 3174 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 PLK4O00444 970 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 TRAFD1O14545 582 aaPredicted RBP15.63■□□□□ 0.09
SS18-216ENST00000580751 HTRA2O43464 458 aaPredicted RBP15.63■□□□□ 0.09
SS18-216ENST00000580751 RHOBTB1O94844 696 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 NFKB1P19838 968 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 NFKBIAP25963 317 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 ACSL1P33121 698 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 ADCY8P40145 1251 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 NBL1P41271 181 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 CD86P42081 329 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 SLC7A5Q01650 507 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 NIPAL4Q0D2K0 466 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 TRAF2Q12933 501 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 CALCOCO2Q13137 446 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 PLK5Q496M5 336 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 MAP9Q49MG5 647 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 PMS2CLQ68D20 193 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 PRR23BQ6ZRT6 265 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 CEP128Q6ZU80 1094 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.63■□□□□ 0.09
SS18-216ENST00000580751 CADM4Q8NFZ8 388 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 OR2T34Q8NGX1 318 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 FOXJ1Q92949 421 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 SNF8Q96H20 258 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 ZC3H10Q96K80 434 aaKnown RBP15.63■□□□□ 0.09
SS18-216ENST00000580751 GPR174Q9BXC1 333 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 TDRD1Q9BXT4 1180 aaKnown RBP15.63■□□□□ 0.09
SS18-216ENST00000580751 PARD6BQ9BYG5 372 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 FRMD8Q9BZ67 464 aaPredicted RBP15.63■□□□□ 0.09
SS18-216ENST00000580751 GBA3Q9H227 469 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 PREBQ9HCU5 417 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 ARGLU1Q9NWB6 273 aaPredicted RBP15.63■□□□□ 0.09
SS18-216ENST00000580751 RSPH14Q9UHP6 348 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 RAB23Q9ULC3 237 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 TPX2Q9ULW0 747 aaKnown RBP15.63■□□□□ 0.09
SS18-216ENST00000580751 PCDHGC4Q9Y5F7 938 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 RAI2Q9Y5P3 530 aa15.63■□□□□ 0.09
SS18-216ENST00000580751 ANKRD36A6QL64 1941 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 CCDC151A5D8V7 595 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 UPK3BL1B0FP48 263 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 UPK3BL2E5RIL1 263 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 DYNC1I1O14576 645 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 AP1G1O43747 822 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 ERLIN1O75477 346 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 CPP00450 1065 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 IFNB1P01574 187 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 IVDP26440 423 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 CD68P34810 354 aaPredicted RBP15.62■□□□□ 0.09
SS18-216ENST00000580751 FDFT1P37268 417 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 SKOR1P84550 965 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 UGP2Q16851 508 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 PARP6Q2NL67 630 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 ANKRD20A2Q5SQ80 823 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 ARMC12Q5T9G4 340 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 ANKRD20A1Q5TYW2 823 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 ANKRD20A3Q5VUR7 823 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 ERAP2Q6P179 960 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 CCNI2Q6ZMN8 369 aaPredicted RBP15.62■□□□□ 0.09
SS18-216ENST00000580751 ARHGEF18Q6ZSZ5 1173 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 TTC7BQ86TV6 843 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 HOOK3Q86VS8 718 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 PDCD6IPQ8WUM4 868 aaKnown RBP15.62■□□□□ 0.09
SS18-216ENST00000580751 HNRNPLLQ8WVV9 542 aaKnown RBP15.62■□□□□ 0.09
SS18-216ENST00000580751 NSMCE3Q96MG7 304 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 FCRL5Q96RD9 977 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 DUSP15Q9H1R2 295 aaPredicted RBP15.62■□□□□ 0.09
SS18-216ENST00000580751 VPS45Q9NRW7 570 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.62■□□□□ 0.09
SS18-216ENST00000580751 PCDHB9Q9Y5E1 797 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 V9GYY5 206 aaPredicted RBP15.62■□□□□ 0.09
SS18-216ENST00000580751 NUMA1Q14980 2115 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 GPR179Q6PRD1 2367 aa15.62■□□□□ 0.09
SS18-216ENST00000580751 FAM47DPA6NHR8 397 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 NEMP1O14524 444 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 ANXA9O76027 345 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 SEC31AO94979 1220 aaKnown RBP15.61■□□□□ 0.09
SS18-216ENST00000580751 PGLSO95336 258 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 MMP2P08253 660 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 RPL22P35268 128 aaKnown RBP15.61■□□□□ 0.09
SS18-216ENST00000580751 ABL2P42684 1182 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 MAGEA6P43360 314 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 GDF10P55107 478 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 TAS2R38P59533 333 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 RPL26P61254 145 aaKnown RBP15.61■□□□□ 0.09
SS18-216ENST00000580751 CDK16Q00536 496 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 ELP6Q0PNE2 266 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 CBLBQ13191 982 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 MORF4L2Q15014 288 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 NEK5Q6P3R8 708 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 PRPF39Q86UA1 669 aaKnown RBP15.61■□□□□ 0.09
SS18-216ENST00000580751 NDUFAF2Q8N183 169 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 CCDC110Q8TBZ0 833 aa15.61■□□□□ 0.09
SS18-216ENST00000580751 TADA1Q96BN2 335 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms