RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 NLRP9Q7RTR0 991 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TEX26Q8N6G2 289 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 OR6K2Q8NGY2 324 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ARRDC2Q8TBH0 407 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SREK1Q8WXA9 508 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CDKL2Q92772 493 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 MRGPRX2Q96LB1 330 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TTYH1Q9H313 450 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 NSUN3Q9H649 340 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CHRAC1Q9NRG0 131 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TXNDC16Q9P2K2 825 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 VPS51Q9UID3 782 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ZNF180Q9UJW8 692 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 FGF19O95750 216 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 LATS1O95835 1130 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 GCKP35557 465 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SERPINB4P48594 390 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 WNT3AP56704 352 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TNK2Q07912 1038 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 MESP2Q0VG99 397 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 PRPSAP1Q14558 356 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 PTPRRQ15256 657 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CYTH1Q15438 398 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 MPPE1Q53F39 396 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CES4AQ5XG92 561 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ATXN7L3BQ96GX2 97 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CLEC1BQ9P126 229 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 UBA2Q9UBT2 640 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 MARCOQ9UEW3 520 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 GOLGA8TH3BQL2 631 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 RFPL1O75677 317 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ZMPSTE24O75844 475 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 PRKCGP05129 697 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 PIRTP0C851 137 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ERVK-10P10266 1014 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 MLNP12872 115 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 PGAM1P18669 254 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 IGFBP4P22692 258 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 DDX6P26196 483 aaKnown RBP eCLIP12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 STK19P49842 368 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ADGRE1Q14246 886 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 POU6F1Q14863 301 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 DENND5AQ6IQ26 1287 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 RASSF3Q86WH2 238 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CPXM2Q8N436 756 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 LEMD2Q8NC56 503 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 IRF7Q92985 503 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SLC7A6OSQ96CW6 309 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 MFSD3Q96ES6 412 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 IMP4Q96G21 291 aaKnown RBP12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TM6SF2Q9BZW4 377 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ZFATQ9P243 1243 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ARMCX1Q9P291 453 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 DENND4CQ5VZ89 1909 aa12.79□□□□□ -0.36
CDK5RAP3-217ENST00000580287 A0A0U1RQS6 177 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TBX10O75333 385 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SMNDC1O75940 238 aaKnown RBP eCLIP12.78□□□□□ -0.362e-22■□□□□ 9.5
CDK5RAP3-217ENST00000580287 POLBP06746 335 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 KITP10721 976 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TYRP14679 529 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 GKP32189 559 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ETV4P43268 484 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 PDE1BQ01064 536 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ATXN7L2Q5T6C5 722 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SH2D5Q6ZV89 423 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 GPR149Q86SP6 731 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 PNPLA1Q8N8W4 532 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ZNF669Q96BR6 464 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 FCRL3Q96P31 734 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 FSD1LQ9BXM9 530 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SLC25A51Q9H1U9 297 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 EBF3Q9H4W6 596 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 EIF2B3Q9NR50 452 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SPHK2Q9NRA0 654 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CLDND1Q9NY35 253 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 BNIP3LO60238 219 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ENTPD5O75356 428 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TMCC1O94876 653 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ARSAP15289 507 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TMPRSS15P98073 1019 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TANGO2Q6ICL3 276 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ANKRD54Q6NXT1 300 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 DNAJC14Q6Y2X3 702 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SORCS1Q8WY21 1168 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 MTBPQ96DY7 904 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ASB16Q96NS5 453 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TBL1YQ9BQ87 522 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CINPQ9BW66 212 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TBC1D10AQ9BXI6 508 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TRIM55Q9BYV6 548 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 PRO3102Q9H379 93 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CASS4Q9NQ75 786 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 MOCS1Q9NZB8 636 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ZNF510Q9Y2H8 683 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 AAR2Q9Y312 384 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 PLLPQ9Y342 182 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 PCDHGC4Q9Y5F7 938 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 PSAT1Q9Y617 370 aa12.78□□□□□ -0.36
CDK5RAP3-217ENST00000580287 FAM237BA0A1B0GVD1 139 aa12.77□□□□□ -0.36
CDK5RAP3-217ENST00000580287 HMX2A2RU54 273 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms