RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 CFAP69A5D8W1 941 aa18.05■□□□□ 0.48
MKS1-209ENST00000580127 CACNB4O00305 520 aaPredicted RBP18.05■□□□□ 0.48
MKS1-209ENST00000580127 SLC5A2P31639 672 aa18.05■□□□□ 0.48
MKS1-209ENST00000580127 KCNC4Q03721 635 aa18.05■□□□□ 0.48
MKS1-209ENST00000580127 AGERQ15109 404 aa18.05■□□□□ 0.48
MKS1-209ENST00000580127 WSCD2Q2TBF2 565 aa18.05■□□□□ 0.48
MKS1-209ENST00000580127 RAB6CQ53S08 254 aa18.05■□□□□ 0.48
MKS1-209ENST00000580127 WDR59Q6PJI9 974 aa18.05■□□□□ 0.48
MKS1-209ENST00000580127 ZSCAN1Q8NBB4 408 aa18.05■□□□□ 0.48
MKS1-209ENST00000580127 C3orf20Q8ND61 904 aa18.05■□□□□ 0.48
MKS1-209ENST00000580127 COL26A1Q96A83 441 aa18.05■□□□□ 0.48
MKS1-209ENST00000580127 CCDC74AQ96AQ1 378 aa18.05■□□□□ 0.48
MKS1-209ENST00000580127 PCMTD1Q96MG8 357 aaPredicted RBP18.05■□□□□ 0.48
MKS1-209ENST00000580127 WDR92Q96MX6 357 aa18.05■□□□□ 0.48
MKS1-209ENST00000580127 ARHGAP9Q9BRR9 750 aa18.05■□□□□ 0.48
MKS1-209ENST00000580127 RAB6CQ9H0N0 254 aa18.05■□□□□ 0.48
MKS1-209ENST00000580127 VPS16Q9H269 839 aa18.05■□□□□ 0.48
MKS1-209ENST00000580127 LRRN3Q9H3W5 708 aa18.05■□□□□ 0.48
MKS1-209ENST00000580127 NLRC4Q9NPP4 1024 aa18.05■□□□□ 0.48
MKS1-209ENST00000580127 FAM207AQ9NSI2 230 aaPredicted RBP18.05■□□□□ 0.48
MKS1-209ENST00000580127 AKAP7Q9P0M2 348 aaPredicted RBP18.05■□□□□ 0.48
MKS1-209ENST00000580127 PCDHB11Q9Y5F2 797 aa18.05■□□□□ 0.48
MKS1-209ENST00000580127 HEMK1Q9Y5R4 338 aaPredicted RBP18.05■□□□□ 0.48
MKS1-209ENST00000580127 WASH4PA8MWX3 477 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 PDE2AO00408 941 aaPredicted RBP18.04■□□□□ 0.48
MKS1-209ENST00000580127 RPLP0P05388 317 aaKnown RBP18.04■□□□□ 0.48
MKS1-209ENST00000580127 CCDC172P0C7W6 258 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 SFTPCP11686 197 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 UNGP13051 313 aaPredicted RBP18.04■□□□□ 0.48
MKS1-209ENST00000580127 CHRNB2P17787 502 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 UGT1A5P35504 534 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 LIG3P49916 1009 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 ZNF143P52747 638 aaPredicted RBP18.04■□□□□ 0.48
MKS1-209ENST00000580127 CCL7P80098 99 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 CLN3Q13286 438 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 MTM1Q13496 603 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 ARHGEF7Q14155 803 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 ALG11Q2TAA5 492 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 KIAA1614Q5VZ46 1190 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 TAF8Q7Z7C8 310 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 PHF13Q86YI8 300 aaPredicted RBP18.04■□□□□ 0.48
MKS1-209ENST00000580127 MAGEB5Q9BZ81 275 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 FAM117AQ9C073 453 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 NUP62CLQ9H1M0 184 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 ATP13A3Q9H7F0 1226 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 PCDH12Q9NPG4 1184 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 SEPT11Q9NVA2 429 aaKnown RBP18.04■□□□□ 0.48
MKS1-209ENST00000580127 TAB2Q9NYJ8 693 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 DGKBQ9Y6T7 804 aa18.04■□□□□ 0.48
MKS1-209ENST00000580127 ASH1LQ9NR48 2969 aaKnown RBP18.04■□□□□ 0.48
MKS1-209ENST00000580127 ARHGAP42A6NI28 874 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 D6RAR5 112 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 NVLO15381 856 aaKnown RBP18.03■□□□□ 0.48
MKS1-209ENST00000580127 PNLIPP16233 465 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 GLB1P16278 677 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 ITIH2P19823 946 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 SERPINA4P29622 427 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 CCKBRP32239 447 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 CSNK1DP48730 415 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 NDST2P52849 883 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 GSCP56915 257 aaPredicted RBP18.03■□□□□ 0.48
MKS1-209ENST00000580127 CYTH1Q15438 398 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 TMEM164Q5U3C3 297 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 DNAJC24Q6P3W2 148 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 DCUN1D2Q6PH85 259 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 KYQ8NBH2 561 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 FAM46DQ8NEK8 389 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 CMKLR1Q99788 373 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 CNPY3Q9BT09 278 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.03■□□□□ 0.48
MKS1-209ENST00000580127 GANQ9H2C0 597 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 CLMPQ9H6B4 373 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 NOL6Q9H6R4 1146 aaKnown RBP18.03■□□□□ 0.48
MKS1-209ENST00000580127 PNMA8BQ9ULN7 279 aaPredicted RBP18.03■□□□□ 0.48
MKS1-209ENST00000580127 ATP8A1Q9Y2Q0 1164 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 COQ6Q9Y2Z9 468 aa18.03■□□□□ 0.48
MKS1-209ENST00000580127 EIF3CLB5ME19 914 aaKnown RBP18.02■□□□□ 0.48
MKS1-209ENST00000580127 TNFRSF10CO14798 259 aa18.02■□□□□ 0.48
MKS1-209ENST00000580127 DAPK3O43293 454 aa18.02■□□□□ 0.48
MKS1-209ENST00000580127 NFKBIAP25963 317 aa18.02■□□□□ 0.48
MKS1-209ENST00000580127 TPI1P60174 286 aa18.02■□□□□ 0.48
MKS1-209ENST00000580127 C1QBPQ07021 282 aaKnown RBP18.02■□□□□ 0.48
MKS1-209ENST00000580127 CLEC16AQ2KHT3 1053 aa18.02■□□□□ 0.48
MKS1-209ENST00000580127 TSR1Q2NL82 804 aaKnown RBP18.02■□□□□ 0.48
MKS1-209ENST00000580127 PPP1R2P3Q6NXS1 205 aa18.02■□□□□ 0.48
MKS1-209ENST00000580127 CCNJLQ8IV13 435 aa18.02■□□□□ 0.48
MKS1-209ENST00000580127 PYROXD2Q8N2H3 581 aa18.02■□□□□ 0.48
MKS1-209ENST00000580127 Q8N9G6 341 aaPredicted RBP18.02■□□□□ 0.48
MKS1-209ENST00000580127 NEK11Q8NG66 645 aa18.02■□□□□ 0.48
MKS1-209ENST00000580127 ENOX1Q8TC92 643 aaKnown RBP18.02■□□□□ 0.48
MKS1-209ENST00000580127 SGF29Q96ES7 293 aa18.02■□□□□ 0.48
MKS1-209ENST00000580127 RBM15Q96T37 977 aaKnown RBP eCLIP18.02■□□□□ 0.48
MKS1-209ENST00000580127 EIF3CQ99613 913 aaKnown RBP18.02■□□□□ 0.48
MKS1-209ENST00000580127 PIEZO2Q9H5I5 2752 aa18.02■□□□□ 0.48
MKS1-209ENST00000580127 KCTD5Q9NXV2 234 aa18.02■□□□□ 0.48
MKS1-209ENST00000580127 APPL1Q9UKG1 709 aa18.02■□□□□ 0.48
MKS1-209ENST00000580127 ACSL6Q9UKU0 697 aa18.02■□□□□ 0.48
MKS1-209ENST00000580127 FZD10Q9ULW2 581 aa18.02■□□□□ 0.48
MKS1-209ENST00000580127 NEU3Q9UQ49 428 aa18.02■□□□□ 0.48
MKS1-209ENST00000580127 OR1A2Q9Y585 309 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms