RNA–Protein interactions for RNA: ENST00000580034.2

RTTN-205, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 824 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-205	ENST00000580034	PRPF6	O94906	941 aa	Known RBP	4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	TNNC2	P02585	160 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	ANXA6	P08133	673 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	RALA	P11233	206 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	CCDC130	P13994	396 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	NME1	P15531	152 aa	Known RBP	4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	TCN2	P20062	427 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	HNRNPA2B1	P22626	353 aa	Known RBP	4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	CD70	P32970	193 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	DRD3	P35462	400 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	UGT1A3	P35503	534 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	DDIT3	P35638	169 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	CSK	P41240	450 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	NUMB	P49757	651 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	METAP1	P53582	386 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	ADK	P55263	362 aa	Known RBP	4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	MAP3K7CL	P57077	242 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	ETF1	P62495	437 aa	Known RBP	4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	COG7	P83436	770 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	PDE4C	Q08493	712 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	C1orf61	Q13536	156 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	PDE1C	Q14123	709 aa	Predicted RBP	4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	NADK2	Q4G0N4	442 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	ZRANB3	Q5FWF4	1079 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	C9orf64	Q5T6V5	341 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	SP5	Q6BEB4	398 aa	Predicted RBP	4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	SLFN12L	Q6IEE8	588 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	LRFN4	Q6PJG9	635 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	SPNS3	Q6ZMD2	512 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	GCNT7	Q6ZNI0	430 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034		Q6ZSR6	202 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	KCNK18	Q7Z418	384 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	BRSK2	Q8IWQ3	736 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	DIS3L2	Q8IYB7	885 aa	Known RBP	4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	UNC5B	Q8IZJ1	945 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	RBFA	Q8N0V3	343 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	CPXM2	Q8N436	756 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	KY	Q8NBH2	561 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	WFDC5	Q8TCV5	224 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	TMEM159	Q96B96	161 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	SLC45A3	Q96JT2	553 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	HAPLN3	Q96S86	360 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	PLIN2	Q99541	437 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	BOC	Q9BWV1	1114 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	RAB34	Q9BZG1	259 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	VPS11	Q9H270	941 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	LRRN3	Q9H3W5	708 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	COMMD8	Q9NX08	183 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	SPAST	Q9UBP0	616 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	APOBEC3B	Q9UH17	382 aa	Known RBP	4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	SIX4	Q9UIU6	781 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	ING1	Q9UK53	422 aa	Predicted RBP	4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	STRIP2	Q9ULQ0	834 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	ZNF281	Q9Y2X9	895 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	NME7	Q9Y5B8	376 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	HS3ST3A1	Q9Y663	406 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	CSNK1G3	Q9Y6M4	447 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	PKDREJ	Q9NTG1	2253 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	NBEAL1	Q6ZS30	2694 aa		4.57	□□□□□ -1.68
RTTN-205	ENST00000580034	RTTN	Q86VV8	2226 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034		A0A1W2PQM1	296 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034		A0A1W2PQU0	124 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	FAM92A	A1XBS5	289 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	GOLGA8IP	A6NC78	632 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034		A6NCN8	305 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	GOLGA8J	A6NMD2	632 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	TPP1	O14773	563 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	SLC7A4	O43246	635 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	TBL1X	O60907	577 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	TBCA	O75347	108 aa	Known RBP	4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	BEST1	O76090	585 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	PCDH8	O95206	1070 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	CSF2	P04141	144 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	KRT18	P05783	430 aa	Known RBP	4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	CCL4	P13236	92 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	ADORA2B	P29275	332 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	NOP2	P46087	812 aa	Known RBP	4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	LIMS1	P48059	325 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	SGSH	P51688	502 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	ERVFRD-1	P60508	538 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	MC1R	Q01726	317 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	CNTN1	Q12860	1018 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	TRIM29	Q14134	588 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	FZD2	Q14332	565 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	ELAVL3	Q14576	367 aa	Known RBP	4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	INPP5J	Q15735	1006 aa	Predicted RBP	4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	SMN1	Q16637	294 aa	Known RBP	4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	ARHGAP44	Q17R89	818 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	SMTNL2	Q2TAL5	461 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	C14orf28	Q4W4Y0	310 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	VWA3B	Q502W6	1294 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	AGBL4	Q5VU57	503 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	KLHDC10	Q6PID8	442 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	SCARA5	Q6ZMJ2	495 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	GPRIN1	Q7Z2K8	1008 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	RD3	Q7Z3Z2	195 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	KDELC2	Q7Z4H8	507 aa		4.56	□□□□□ -1.68
RTTN-205	ENST00000580034	MFN1	Q8IWA4	741 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms