RNA–Protein interactions for RNA: ENST00000579632.5

CDK5RAP3-214, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-214ENST00000579632 MYBL2P10244 700 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 C5AR1P21730 350 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 ITGB7P26010 798 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 CHRNA4P43681 627 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 RPS9P46781 194 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 DGKEP52429 567 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 SESN2P58004 480 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 SATB1Q01826 763 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 SFSWAPQ12872 951 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 PDIA2Q13087 525 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 FZD5Q13467 585 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 OLIG2Q13516 323 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 GALNT3Q14435 633 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 CRY1Q16526 586 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 QPCTQ16769 361 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 UGP2Q16851 508 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 BBS9Q3SYG4 887 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 CCDC38Q502W7 563 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 SYT13Q7L8C5 426 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 CCDC25Q86WR0 208 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 MMAAQ8IVH4 418 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 SLC25A41Q8N5S1 370 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 PJA1Q8NG27 643 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 PIP4K2CQ8TBX8 421 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 BRSK1Q8TDC3 778 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 AENQ8WTP8 325 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 PYROXD1Q8WU10 500 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 CAVIN3Q969G5 261 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 CLDN23Q96B33 292 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 SCRN2Q96FV2 425 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 RANBP9Q96S59 729 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 LYSMD1Q96S90 227 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 HDAC8Q9BY41 377 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 CD248Q9HCU0 757 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 SCML1Q9UN30 329 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 SIT1Q9Y3P8 196 aa10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 MTF2Q9Y483 593 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-214ENST00000579632 A0A0J9YYE9 177 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 HEATR9A2RTY3 570 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 C16orf96A6NNT2 1141 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 CRTAMO95727 393 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 TTC4O95801 387 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 TRBC1P01850 177 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 FAM153BP0C7A2 387 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 TSHRP16473 764 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 XPAP23025 273 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 ADRA1DP25100 572 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 MGAT1P26572 445 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 MAGEA4P43358 317 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 MAGEA9P43362 315 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 COPAP53621 1224 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 PDE1BQ01064 536 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 DHX9Q08211 1270 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 MSLNQ13421 630 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 CST6Q15828 149 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 FAM153CQ494X1 144 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 MSS51Q4VC12 460 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 PCID2Q5JVF3 399 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 CERCAMQ5T4B2 595 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 KIAA1211LQ6NV74 962 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 ERAP2Q6P179 960 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 CASC4Q6P4E1 433 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 FBXL19Q6PCT2 694 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 TRMT10CQ7L0Y3 403 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 NLRP9Q7RTR0 991 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 TMC3Q7Z5M5 1100 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 TTC7BQ86TV6 843 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 TMPRSS6Q8IU80 811 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 ZBED8Q8IZ13 594 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 PEX13Q92968 403 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 RAB7BQ96AH8 199 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 SIGLEC10Q96LC7 697 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 PWWP2AQ96N64 755 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 TTC25Q96NG3 672 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 NECAB3Q96P71 396 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 MCCC1Q96RQ3 725 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 EBNA1BP2Q99848 306 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 C19orf43Q9BQ61 176 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 FOXQ1Q9C009 403 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 MFSD1Q9H3U5 465 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 MRM3Q9HC36 420 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 POLMQ9NP87 494 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 SAYSD1Q9NPB0 183 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 PIH1D1Q9NWS0 290 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 SARDHQ9UL12 918 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 MAD1L1Q9Y6D9 718 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 TEX264Q9Y6I9 313 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 COL4A3Q01955 1670 aa10.59□□□□□ -0.71
CDK5RAP3-214ENST00000579632 FAM237BA0A1B0GVD1 139 aa10.58□□□□□ -0.72
CDK5RAP3-214ENST00000579632 CAPN8A6NHC0 703 aa10.58□□□□□ -0.72
CDK5RAP3-214ENST00000579632 C2orf81A6NN90 581 aa10.58□□□□□ -0.72
CDK5RAP3-214ENST00000579632 UPK3BL1B0FP48 263 aa10.58□□□□□ -0.72
CDK5RAP3-214ENST00000579632 UPK3BL2E5RIL1 263 aa10.58□□□□□ -0.72
CDK5RAP3-214ENST00000579632 SPAG6O75602 509 aa10.58□□□□□ -0.72
CDK5RAP3-214ENST00000579632 ALDH1A2O94788 518 aa10.58□□□□□ -0.72
CDK5RAP3-214ENST00000579632 PAPSS2O95340 614 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-214ENST00000579632 DNTTP04053 509 aa10.58□□□□□ -0.72
CDK5RAP3-214ENST00000579632 POLBP06746 335 aa10.58□□□□□ -0.72
CDK5RAP3-214ENST00000579632 GSTA2P09210 222 aa10.58□□□□□ -0.72
CDK5RAP3-214ENST00000579632 TIMP2P16035 220 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms