RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	BTNL10	A8MVZ5	291 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	RIOK3	O14730	519 aa	Known RBP	13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	MATN3	O15232	486 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	HTRA2	O43464	458 aa	Predicted RBP	13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	PSTPIP1	O43586	416 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	SPOP	O43791	374 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	SOCS5	O75159	536 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	TM7SF2	O76062	418 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	THEGL	P0DJG4	465 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	ZFX	P17010	805 aa	Predicted RBP	13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	GRK6	P43250	576 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	GBE1	Q04446	702 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	SHB	Q15464	509 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	TRIP6	Q15654	476 aa	Known RBP	13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	TAZ	Q16635	292 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	INAVA	Q3KP66	663 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	SLC9A4	Q6AI14	798 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	ALG1L	Q6GMV1	187 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	C11orf63	Q6NUN7	778 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	ERAP2	Q6P179	960 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	ZSWIM9	Q86XI8	627 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	BAHD1	Q8TBE0	780 aa	Predicted RBP	13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	CXorf40A	Q8TE69	158 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	SAP25	Q8TEE9	199 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	SETD7	Q8WTS6	366 aa	Known RBP	13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	ADAMTS14	Q8WXS8	1223 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	CENPT	Q96BT3	561 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	HDAC11	Q96DB2	347 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	IFT43	Q96FT9	208 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	NSMCE3	Q96MG7	304 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	CDC6	Q99741	560 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	BAG1	Q99933	345 aa	Predicted RBP	13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	MAK16	Q9BXY0	300 aa	Known RBP	13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	NOD2	Q9HC29	1040 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	SCUBE2	Q9NQ36	999 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	DTL	Q9NZJ0	730 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	CA5B	Q9Y2D0	317 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	ATP8A1	Q9Y2Q0	1164 aa		13.75	□□□□□ -0.21
CSNK1D-208	ENST00000578501	TRPM6	Q9BX84	2022 aa		13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	TOR1B	O14657	336 aa		13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	FPGT	O14772	594 aa		13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	RAD51B	O15315	384 aa		13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	MMP20	O60882	483 aa		13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	ITIH2	P19823	946 aa		13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	CES1	P23141	567 aa		13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	MMP12	P39900	470 aa		13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	RABIF	P47224	123 aa		13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	CLDN2	P57739	230 aa		13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	SLC10A2	Q12908	348 aa	Predicted RBP	13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	AGER	Q15109	404 aa		13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	ODF2	Q5BJF6	829 aa		13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	LRRC73	Q5JTD7	316 aa		13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	RAD9B	Q6WBX8	426 aa		13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501		Q6ZSR6	202 aa		13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	PLD5	Q8N7P1	536 aa		13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	OR13H1	Q8NG92	308 aa		13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	RHBDD1	Q8TEB9	315 aa		13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	ZNF830	Q96NB3	372 aa	Predicted RBP	13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	MYOC	Q99972	504 aa		13.74	□□□□□ -0.21
CSNK1D-208	ENST00000578501	DOCK9	Q9BZ29	2069 aa		13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	POM121B	A6NF01	834 aa		13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	APOL1	O14791	398 aa		13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	KRT1	P04264	644 aa		13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	ITGAV	P06756	1048 aa		13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	CCNB1	P14635	433 aa		13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	EPHA8	P29322	1005 aa	Predicted RBP	13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	PFN3	P60673	137 aa		13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	FAM193A	P78312	1265 aa		13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	PPID	Q08752	370 aa	Known RBP	13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	PRAMEF14	Q5SWL7	426 aa		13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	KANSL1	Q7Z3B3	1105 aa		13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	TMEM139	Q8IV31	216 aa		13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	TPCN2	Q8NHX9	752 aa		13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	WRAP53	Q9BUR4	548 aa	Known RBP	13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	POLR1E	Q9GZS1	481 aa	Known RBP	13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	BRD8	Q9H0E9	1235 aa		13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	NT5M	Q9NPB1	228 aa		13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	SALL4	Q9UJQ4	1053 aa		13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	TFR2	Q9UP52	801 aa		13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	APOBEC2	Q9Y235	224 aa	Known RBP	13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	BTBD3	Q9Y2F9	522 aa		13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	REXO2	Q9Y3B8	237 aa	Known RBP	13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	HYOU1	Q9Y4L1	999 aa		13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	TMEM131	Q92545	1883 aa		13.73	□□□□□ -0.21
CSNK1D-208	ENST00000578501	AKAP13	Q12802	2813 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	KNL1	Q8NG31	2342 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	SPTY2D1-AS1	A0A0U1RR47	76 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	RCCD1	A6NED2	376 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	PJA2	O43164	708 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	MAP3K6	O95382	1288 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	C6	P13671	934 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	NFKBIA	P25963	317 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	CDKN2B	P42772	138 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	NR2C2	P49116	596 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	LIG3	P49916	1009 aa		13.72	□□□□□ -0.21
CSNK1D-208	ENST00000578501	VAV2	P52735	878 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms