RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 ALPPL2P10696 532 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 TNNT1P13805 278 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 ADRB3P13945 408 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 HNRNPA2B1P22626 353 aaKnown RBP12.9□□□□□ -0.34
CCDC57-211ENST00000578187 CTNNA1P35221 906 aaKnown RBP12.9□□□□□ -0.34
CCDC57-211ENST00000578187 HSPA9P38646 679 aaKnown RBP12.9□□□□□ -0.34
CCDC57-211ENST00000578187 CDKN2BP42772 138 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 MARCKSL1P49006 195 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 NSUN2Q08J23 767 aaKnown RBP eCLIP12.9□□□□□ -0.34
CCDC57-211ENST00000578187 KIF5AQ12840 1032 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 GRM3Q14832 879 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 SHBQ15464 509 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 IFI16Q16666 785 aaKnown RBP12.9□□□□□ -0.34
CCDC57-211ENST00000578187 KIAA1161Q6NSJ0 714 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 MFSD7Q6UXD7 560 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 GDPD4Q6W3E5 623 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 DCP2Q8IU60 420 aaKnown RBP12.9□□□□□ -0.34
CCDC57-211ENST00000578187 MAML1Q92585 1016 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 KRT35Q92764 455 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 FATE1Q969F0 183 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 RAB7BQ96AH8 199 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 HDAC11Q96DB2 347 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 TSGA13Q96PP4 275 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 TUBGCP5Q96RT8 1024 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 DTLQ9NZJ0 730 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 DKK3Q9UBP4 350 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 TRIM10Q9UDY6 481 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 GPSM3Q9Y4H4 160 aa12.9□□□□□ -0.34
CCDC57-211ENST00000578187 TSPAN11A1L157 253 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 C16orf96A6NNT2 1141 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 A6NNZ2 444 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 APOL1O14791 398 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 SPINT1O43278 529 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 AP1G1O43747 822 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 MAP3K6O95382 1288 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 PIGNO95427 931 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 PRLRP16471 622 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 CKMT2P17540 419 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 CR2P20023 1033 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 MX2P20592 715 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 CTNNA2P26232 953 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 ABL2P42684 1182 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 ACADVLP49748 655 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 RENBPP51606 427 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 NAP1L1P55209 391 aaKnown RBP12.89□□□□□ -0.35
CCDC57-211ENST00000578187 RPS21P63220 83 aaKnown RBP12.89□□□□□ -0.35
CCDC57-211ENST00000578187 CCZ1BP86790 482 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 CCZ1P86791 482 aaPredicted RBP12.89□□□□□ -0.35
CCDC57-211ENST00000578187 CYP4F3Q08477 520 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 SLC10A2Q12908 348 aaPredicted RBP12.89□□□□□ -0.35
CCDC57-211ENST00000578187 BNIP3Q12983 259 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 DNAJC3Q13217 504 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 ZNF235Q14590 738 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 ODF2Q5BJF6 829 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 TIGD7Q6NT04 549 aaPredicted RBP12.89□□□□□ -0.35
CCDC57-211ENST00000578187 SPOCD1Q6ZMY3 1216 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 SRLQ86TD4 932 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 SPATS2Q86XZ4 545 aaKnown RBP12.89□□□□□ -0.35
CCDC57-211ENST00000578187 LRRC8AQ8IWT6 810 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 PGBD5Q8N414 524 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 TEX26Q8N6G2 289 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 TMEM145Q8NBT3 493 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 EXD1Q8NHP7 514 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.89□□□□□ -0.35
CCDC57-211ENST00000578187 FEM1CQ96JP0 617 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 KLHL32Q96NJ5 620 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 MYOCQ99972 504 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 MGME1Q9BQP7 344 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 RAXQ9Y2V3 346 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCDC57-211ENST00000578187 FADS3Q9Y5Q0 445 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 PLXNB3Q9ULL4 1909 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 FREM2Q5SZK8 3169 aa12.89□□□□□ -0.35
CCDC57-211ENST00000578187 MACROD2A1Z1Q3 448 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 NEMP2A6NFY4 417 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 NEMP1O14524 444 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 SDC3O75056 442 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 ZFXP17010 805 aaPredicted RBP12.88□□□□□ -0.35
CCDC57-211ENST00000578187 CCNCP24863 283 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 MMP13P45452 471 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 AP1S1P61966 158 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 DAB2P98082 770 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 PPIDQ08752 370 aaKnown RBP12.88□□□□□ -0.35
CCDC57-211ENST00000578187 SGCGQ13326 291 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 ZNF211Q13398 564 aaPredicted RBP12.88□□□□□ -0.35
CCDC57-211ENST00000578187 PPP2R5EQ16537 467 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 ZNF284Q2VY69 593 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 TFDP3Q5H9I0 405 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 HES3Q5TGS1 186 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 MARC1Q5VT66 337 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 PTAR1Q7Z6K3 402 aaPredicted RBP12.88□□□□□ -0.35
CCDC57-211ENST00000578187 NT5DC3Q86UY8 548 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 RFX6Q8HWS3 928 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 RCOR2Q8IZ40 523 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 BBS5Q8N3I7 341 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 KIAA1524Q8TCG1 905 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 HCAR2Q8TDS4 363 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 NSMCE1Q8WV22 266 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 KLK6Q92876 244 aa12.88□□□□□ -0.35
CCDC57-211ENST00000578187 IFT43Q96FT9 208 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms