RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 RILPL2Q969X0 211 aa2.53□□□□□ -2
TOP2A-202ENST00000577541 RBM17Q96I25 401 aaKnown RBP2.53□□□□□ -2
TOP2A-202ENST00000577541 TWNKQ96RR1 684 aa2.53□□□□□ -2
TOP2A-202ENST00000577541 YME1L1Q96TA2 773 aa2.53□□□□□ -2
TOP2A-202ENST00000577541 PAGR1Q9BTK6 254 aa2.53□□□□□ -2
TOP2A-202ENST00000577541 STN1Q9H668 368 aaKnown RBP2.53□□□□□ -2
TOP2A-202ENST00000577541 UBTD1Q9HAC8 227 aa2.53□□□□□ -2
TOP2A-202ENST00000577541 OR6C3Q9NZP0 311 aa2.53□□□□□ -2
TOP2A-202ENST00000577541 NDRG3Q9UGV2 375 aa2.53□□□□□ -2
TOP2A-202ENST00000577541 SH2D7A6NKC9 451 aaPredicted RBP2.52□□□□□ -2.01
TOP2A-202ENST00000577541 TULP2O00295 520 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 IRAK2O43187 625 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 ZNF8P17098 575 aaPredicted RBP2.52□□□□□ -2.01
TOP2A-202ENST00000577541 GPTP24298 496 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 RPL3P39023 403 aaKnown RBP2.52□□□□□ -2.01
TOP2A-202ENST00000577541 LIFRP42702 1097 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 PAPOLAP51003 745 aaKnown RBP2.52□□□□□ -2.01
TOP2A-202ENST00000577541 BRWD1-AS2P59051 145 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 MYBPHQ13203 477 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 DMP1Q13316 513 aaPredicted RBP2.52□□□□□ -2.01
TOP2A-202ENST00000577541 DHX34Q14147 1143 aaKnown RBP2.52□□□□□ -2.01
TOP2A-202ENST00000577541 XKR9Q5GH70 373 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 ANO1Q5XXA6 986 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 MB21D2Q8IYB1 491 aaPredicted RBP2.52□□□□□ -2.01
TOP2A-202ENST00000577541 CCDC105Q8IYK2 499 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 GHDCQ8N2G8 530 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 CPXM2Q8N436 756 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 VPS37AQ8NEZ2 397 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 LNX1Q8TBB1 728 aaPredicted RBP2.52□□□□□ -2.01
TOP2A-202ENST00000577541 AFG1LQ8WV93 481 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 RUBCNQ92622 972 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 OTULINQ96BN8 352 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 SCMH1Q96GD3 660 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 IL17FQ96PD4 163 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.52□□□□□ -2.01
TOP2A-202ENST00000577541 TRMT61BQ9BVS5 477 aaKnown RBP2.52□□□□□ -2.01
TOP2A-202ENST00000577541 PHF7Q9BWX1 381 aaPredicted RBP2.52□□□□□ -2.01
TOP2A-202ENST00000577541 EPHX3Q9H6B9 360 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 SLC7A10Q9NS82 523 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 SMARCAL1Q9NZC9 954 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 SUFUQ9UMX1 484 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 RRP7AQ9Y3A4 280 aaKnown RBP2.52□□□□□ -2.01
TOP2A-202ENST00000577541 ADAM18Q9Y3Q7 739 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 CACNA1FO60840 1977 aa2.52□□□□□ -2.01
TOP2A-202ENST00000577541 KLK8O60259 260 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 NDUFB4O95168 129 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 PMS2P2O95744 297 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 HMGB1P09429 215 aaKnown RBP2.51□□□□□ -2.01
TOP2A-202ENST00000577541 CSRP3P50461 194 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 PEX5P50542 639 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 RAD23BP54727 409 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 NR1H2P55055 460 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 CYP4A11Q02928 519 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 CAPSQ13938 189 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 OASLQ15646 514 aaKnown RBP2.51□□□□□ -2.01
TOP2A-202ENST00000577541 CALCRLQ16602 461 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 WDR45BQ5MNZ6 344 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 FAM122CQ6P4D5 195 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 NOL8Q76FK4 1167 aaKnown RBP2.51□□□□□ -2.01
TOP2A-202ENST00000577541 EXOC3L1Q86VI1 746 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 SUGP1Q8IWZ8 645 aaKnown RBP2.51□□□□□ -2.01
TOP2A-202ENST00000577541 PGBD5Q8N414 524 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 SPATA5Q8NB90 893 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 CEP70Q8NHQ1 597 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 RASSF8Q8NHQ8 419 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 ARRDC2Q8TBH0 407 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 SORCS1Q8WY21 1168 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 HERVK_113Q902F9 699 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 CNOT9Q92600 299 aaKnown RBP2.51□□□□□ -2.01
TOP2A-202ENST00000577541 FBXO17Q96EF6 278 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 UHRF2Q96PU4 802 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 REEP2Q9BRK0 252 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 TAOK3Q9H2K8 898 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 SLCO3A1Q9UIG8 710 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.51□□□□□ -2.01
TOP2A-202ENST00000577541 NFE2L3Q9Y4A8 694 aa2.51□□□□□ -2.01
TOP2A-202ENST00000577541 ARHGAP10A1A4S6 786 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 PABPN1LA6NDY0 278 aaKnown RBP2.5□□□□□ -2.01
TOP2A-202ENST00000577541 HSPB2A8KAH6 182 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 PER2O15055 1255 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 RTL8CO15255 209 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 HSPA12AO43301 675 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 RFPL2O75678 378 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 TCEA3O75764 348 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 LINC00271P0C7V0 271 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 CD58P19256 250 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 GPD2P43304 727 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 TRAPPC10P48553 1259 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 YWHAZP63104 245 aaKnown RBP2.5□□□□□ -2.01
TOP2A-202ENST00000577541 HSPB2Q16082 182 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 SOWAHAQ2M3V2 549 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 ESCO2Q56NI9 601 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 TYW3Q6IPR3 259 aaKnown RBP2.5□□□□□ -2.01
TOP2A-202ENST00000577541 TUBA1AQ71U36 451 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 SHFQ7M4L6 423 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 C2CD5Q86YS7 1000 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 KLHDC8BQ8IXV7 354 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 DNAAF1Q8NEP3 725 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 SPATA22Q8NHS9 363 aa2.5□□□□□ -2.01
TOP2A-202ENST00000577541 GDPD5Q8WTR4 605 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms