RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 MAPKAPK2P49137 400 aa12.04□□□□□ -0.48
CTNS-208ENST00000574218 PPM1FP49593 454 aaPredicted RBP12.04□□□□□ -0.48
CTNS-208ENST00000574218 INPP5AQ14642 412 aa12.04□□□□□ -0.48
CTNS-208ENST00000574218 C16orf72Q14CZ0 275 aa12.04□□□□□ -0.48
CTNS-208ENST00000574218 AMZ1Q400G9 498 aa12.04□□□□□ -0.48
CTNS-208ENST00000574218 TMEM52BQ4KMG9 183 aa12.04□□□□□ -0.48
CTNS-208ENST00000574218 GJB7Q6PEY0 223 aa12.04□□□□□ -0.48
CTNS-208ENST00000574218 CREBRFQ8IUR6 639 aa12.04□□□□□ -0.48
CTNS-208ENST00000574218 SLITRK4Q8IW52 837 aa12.04□□□□□ -0.48
CTNS-208ENST00000574218 PAF1Q8N7H5 531 aa12.04□□□□□ -0.48
CTNS-208ENST00000574218 TMEM35BQ8NCS4 154 aa12.04□□□□□ -0.48
CTNS-208ENST00000574218 NELFBQ8WX92 580 aa12.04□□□□□ -0.48
CTNS-208ENST00000574218 NKD1Q969G9 470 aa12.04□□□□□ -0.48
CTNS-208ENST00000574218 KIAA1143Q96AT1 154 aaPredicted RBP12.04□□□□□ -0.48
CTNS-208ENST00000574218 CRACR2AQ9BSW2 395 aa12.04□□□□□ -0.48
CTNS-208ENST00000574218 CDH19Q9H159 772 aa12.04□□□□□ -0.48
CTNS-208ENST00000574218 MAGEH1Q9H213 219 aa12.04□□□□□ -0.48
CTNS-208ENST00000574218 SEMA6CQ9H3T2 930 aa12.04□□□□□ -0.48
CTNS-208ENST00000574218 ZNF71Q9NQZ8 489 aaPredicted RBP12.04□□□□□ -0.48
CTNS-208ENST00000574218 DNAI1Q9UI46 699 aa12.04□□□□□ -0.48
CTNS-208ENST00000574218 CTNND2Q9UQB3 1225 aa12.04□□□□□ -0.48
CTNS-208ENST00000574218 OR1A2Q9Y585 309 aa12.04□□□□□ -0.48
CTNS-208ENST00000574218 BECN2A8MW95 431 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 I6L893 689 aaPredicted RBP12.03□□□□□ -0.48
CTNS-208ENST00000574218 HGSO14964 777 aaPredicted RBP12.03□□□□□ -0.48
CTNS-208ENST00000574218 BUB1O43683 1085 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 CD160O95971 181 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 LIFP15018 202 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 SCNN1AP37088 669 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 NOP2P46087 812 aaKnown RBP12.03□□□□□ -0.48
CTNS-208ENST00000574218 RHOAP61586 193 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 MTM1Q13496 603 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 SEPT6Q14141 434 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 CLPPQ16740 277 aaPredicted RBP12.03□□□□□ -0.48
CTNS-208ENST00000574218 TSR1Q2NL82 804 aaKnown RBP12.03□□□□□ -0.48
CTNS-208ENST00000574218 WSCD2Q2TBF2 565 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 EFHC2Q5JST6 749 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 SPECC1LQ69YQ0 1117 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 TTI2Q6NXR4 508 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 TRIM65Q6PJ69 517 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 OGFOD3Q6PK18 319 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 LEKR1Q6ZMV7 388 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 GBP6Q6ZN66 633 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 FAM131BQ86XD5 332 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 IRF2BP1Q8IU81 584 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 CACNA2D3Q8IZS8 1091 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 OR56A4Q8NGH8 313 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 CASKIN2Q8WXE0 1202 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 C18orf8Q96DM3 657 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 PDXPQ96GD0 296 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 EFHD1Q9BUP0 239 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 TTYH3Q9C0H2 523 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 RETREG1Q9H6L5 497 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 RDH14Q9HBH5 336 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 DKK3Q9UBP4 350 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 APEX2Q9UBZ4 518 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 ZNF212Q9UDV6 495 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 DGKBQ9Y6T7 804 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 ICE1Q9Y2F5 2266 aa12.03□□□□□ -0.48
CTNS-208ENST00000574218 NOTCH2Q04721 2471 aa12.02□□□□□ -0.48
CTNS-208ENST00000574218 GOLGA8SH3BPF8 625 aa12.02□□□□□ -0.49
CTNS-208ENST00000574218 TMCC1O94876 653 aa12.02□□□□□ -0.49
CTNS-208ENST00000574218 CCL4P13236 92 aa12.02□□□□□ -0.49
CTNS-208ENST00000574218 TIMP2P16035 220 aa12.02□□□□□ -0.49
CTNS-208ENST00000574218 RHOQP17081 205 aa12.02□□□□□ -0.49
CTNS-208ENST00000574218 ITIH2P19823 946 aa12.02□□□□□ -0.49
CTNS-208ENST00000574218 ALDH4A1P30038 563 aa12.02□□□□□ -0.49
CTNS-208ENST00000574218 CSTF2P33240 577 aaKnown RBP eCLIP12.02□□□□□ -0.49
CTNS-208ENST00000574218 BPIFB4P59827 614 aa12.02□□□□□ -0.49
CTNS-208ENST00000574218 HLTFQ14527 1009 aaKnown RBP eCLIP12.02□□□□□ -0.49
CTNS-208ENST00000574218 FOXR2Q6PJQ5 311 aa12.02□□□□□ -0.49
CTNS-208ENST00000574218 FMR1NBQ8N0W7 255 aaPredicted RBP12.02□□□□□ -0.49
CTNS-208ENST00000574218 RCBTB1Q8NDN9 531 aa12.02□□□□□ -0.49
CTNS-208ENST00000574218 SHC3Q92529 594 aa12.02□□□□□ -0.49
CTNS-208ENST00000574218 NT5C3BQ969T7 300 aa12.02□□□□□ -0.49
CTNS-208ENST00000574218 HMCESQ96FZ2 354 aa12.02□□□□□ -0.49
CTNS-208ENST00000574218 CCDC74BQ96LY2 380 aa12.02□□□□□ -0.49
CTNS-208ENST00000574218 ASPSCR1Q9BZE9 553 aa12.02□□□□□ -0.49
CTNS-208ENST00000574218 GDPD2Q9HCC8 539 aa12.02□□□□□ -0.49
CTNS-208ENST00000574218 PLCB1Q9NQ66 1216 aa12.02□□□□□ -0.49
CTNS-208ENST00000574218 DAAM1Q9Y4D1 1078 aa12.02□□□□□ -0.49
CTNS-208ENST00000574218 UTP20O75691 2785 aaKnown RBP12.02□□□□□ -0.49
CTNS-208ENST00000574218 NBPF19A0A087WUL8 3843 aa12.01□□□□□ -0.49
CTNS-208ENST00000574218 ENO4A6NNW6 628 aa12.01□□□□□ -0.49
CTNS-208ENST00000574218 PDE2AO00408 941 aaPredicted RBP12.01□□□□□ -0.49
CTNS-208ENST00000574218 KDELR3O43731 214 aa12.01□□□□□ -0.49
CTNS-208ENST00000574218 RAD1O60671 282 aa12.01□□□□□ -0.49
CTNS-208ENST00000574218 UGT1A3P35503 534 aa12.01□□□□□ -0.49
CTNS-208ENST00000574218 LIG3P49916 1009 aa12.01□□□□□ -0.49
CTNS-208ENST00000574218 MARSP56192 900 aaKnown RBP12.01□□□□□ -0.49
CTNS-208ENST00000574218 STX17P56962 302 aa12.01□□□□□ -0.49
CTNS-208ENST00000574218 OR1D5P58170 312 aa12.01□□□□□ -0.49
CTNS-208ENST00000574218 KIAA1024LP59773 190 aa12.01□□□□□ -0.49
CTNS-208ENST00000574218 PAK1Q13153 545 aa12.01□□□□□ -0.49
CTNS-208ENST00000574218 TRA2AQ13595 282 aaKnown RBP eCLIP12.01□□□□□ -0.49
CTNS-208ENST00000574218 PEX6Q13608 980 aa12.01□□□□□ -0.49
CTNS-208ENST00000574218 GRM3Q14832 879 aa12.01□□□□□ -0.49
CTNS-208ENST00000574218 EXOC3L4Q17RC7 722 aa12.01□□□□□ -0.49
CTNS-208ENST00000574218 LACTB2Q53H82 288 aaPredicted RBP12.01□□□□□ -0.49
CTNS-208ENST00000574218 NRSN1Q8IZ57 195 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms