RNA–Protein interactions for RNA: ENST00000574085.5

TRPV1-208, Transcript of transient receptor potential cation channel subfamily V member 1, human

TSL 2

Gene TRPV1, Length 2,644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPV1-208	ENST00000574085	CCDC78	A2IDD5	438 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	PFDN6	O15212	129 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	ACOX3	O15254	700 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	MGAM	O43451	1857 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	B4GAT1	O43505	415 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	GPC4	O75487	556 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	ASNS	P08243	561 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	COL11A2	P13942	1736 aa	Predicted RBP	12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	EEF1D	P29692	281 aa	Known RBP	12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	OXTR	P30559	389 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	CYBRD1	Q53TN4	286 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	CERCAM	Q5T4B2	595 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	SPRED1	Q7Z699	444 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	PIGZ	Q86VD9	579 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	CACTIN-AS1	Q8N1I8	211 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	ABHD11	Q8NFV4	315 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	ZNF347	Q96SE7	839 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	HERC2P3	Q9BVR0	1158 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	TRIM15	Q9C019	465 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	OSBPL2	Q9H1P3	480 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	SMPD3	Q9NY59	655 aa	Predicted RBP	12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	HACD3	Q9P035	362 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	DGKB	Q9Y6T7	804 aa		12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	ZNF646	O15015	1829 aa	Predicted RBP	12.8	□□□□□ -0.36
TRPV1-208	ENST00000574085	NPHS1	O60500	1241 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	SEC14L2	O76054	403 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	MSL3P1	P0C860	447 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	HPCAL1	P37235	193 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	ARL4A	P40617	200 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	C1QTNF8	P60827	252 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	SLC12A1	Q13621	1099 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	CCNYL2	Q5T2Q4	361 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	TMTC4	Q5T4D3	741 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	FAM219B	Q5XKK7	198 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	EEF1DP3	Q658K8	133 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	ZNF773	Q6PK81	442 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	MPZL3	Q6UWV2	235 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	DDIAS	Q8IXT1	998 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	RNF149	Q8NC42	400 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	OR7G1	Q8NGA0	311 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	MAGEE2	Q8TD90	523 aa	Predicted RBP	12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	NSUN6	Q8TEA1	469 aa	Known RBP	12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	RAB2B	Q8WUD1	216 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	ZUFSP	Q96AP4	578 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	LRCH3	Q96II8	777 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	CDHR1	Q96JP9	859 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	CSF3R	Q99062	836 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	CTRC	Q99895	268 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	MCMBP	Q9BTE3	642 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	BEGAIN	Q9BUH8	593 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	NIFK	Q9BYG3	293 aa	Known RBP	12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	POMK	Q9H5K3	350 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	MRGBP	Q9NV56	204 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	TBC1D13	Q9NVG8	400 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	KLHL3	Q9UH77	587 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	VPS51	Q9UID3	782 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	USP3	Q9Y6I4	520 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	TRIP11	Q15643	1979 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	AQP12B	A6NM10	295 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	CLDN25	C9JDP6	229 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	KCNK1	O00180	336 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	NME4	O00746	187 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	SNAP29	O95721	258 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	MT-CO1	P00395	513 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	MBL2	P11226	248 aa	Predicted RBP	12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	ELK4	P28324	431 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	PTPN9	P43378	593 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	ACADSB	P45954	432 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	CSRP3	P50461	194 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	ZNF846	Q147U1	533 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085		Q3C1V9	767 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	SIGIRR	Q6IA17	410 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	FRA10AC1	Q70Z53	315 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	SNX29P2	Q8IUI4	249 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	AQP12A	Q8IXF9	295 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	TXNDC5	Q8NBS9	432 aa	Known RBP	12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	CLEC4C	Q8WTT0	213 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	HDAC10	Q969S8	669 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	NXNL1	Q96CM4	212 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	SH3YL1	Q96HL8	342 aa	Predicted RBP	12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	SLC45A3	Q96JT2	553 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	ZNF641	Q96N77	438 aa	Predicted RBP	12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	APOL2	Q9BQE5	337 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	PSD2	Q9BQI7	771 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	RPF1	Q9H9Y2	349 aa	Known RBP	12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	GPN2	Q9H9Y4	310 aa	Predicted RBP	12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	CYP3A43	Q9HB55	503 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	TNFRSF12A	Q9NP84	129 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	CHRAC1	Q9NRG0	131 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	KLHL8	Q9P2G9	620 aa	Predicted RBP	12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	SRCAP	Q6ZRS2	3230 aa		12.79	□□□□□ -0.36
TRPV1-208	ENST00000574085	SPATA31C2	B4DYI2	1134 aa		12.78	□□□□□ -0.36
TRPV1-208	ENST00000574085	B4GALT5	O43286	388 aa		12.78	□□□□□ -0.36
TRPV1-208	ENST00000574085	JRK	O75564	520 aa		12.78	□□□□□ -0.36
TRPV1-208	ENST00000574085	PARN	O95453	639 aa	Known RBP	12.78	□□□□□ -0.36
TRPV1-208	ENST00000574085	GLUD2	P49448	558 aa		12.78	□□□□□ -0.36
TRPV1-208	ENST00000574085	RAD23A	P54725	363 aa		12.78	□□□□□ -0.36
TRPV1-208	ENST00000574085	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	12.78	□□□□□ -0.36
TRPV1-208	ENST00000574085	SMYD5	Q6GMV2	418 aa		12.78	□□□□□ -0.36
TRPV1-208	ENST00000574085	JADE1	Q6IE81	842 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms