RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 INSM1Q01101 510 aaPredicted RBP17.44■□□□□ 0.38
SMG6-212ENST00000573153 TBX2Q13207 712 aaPredicted RBP17.44■□□□□ 0.38
SMG6-212ENST00000573153 SGCGQ13326 291 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 ILKQ13418 452 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 LBRQ14739 615 aaKnown RBP17.44■□□□□ 0.38
SMG6-212ENST00000573153 CCDC157Q569K6 752 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 HES3Q5TGS1 186 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 TMCO4Q5TGY1 634 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 BRAT1Q6PJG6 821 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 PELI3Q8N2H9 469 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 FAM181AQ8N9Y4 354 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 RNF214Q8ND24 703 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 CTNNBL1Q8WYA6 563 aaPredicted RBP17.44■□□□□ 0.38
SMG6-212ENST00000573153 FAF2Q96CS3 445 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 MGME1Q9BQP7 344 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 SP110Q9HB58 689 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 DNAJC28Q9NX36 388 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 NLGN3Q9NZ94 848 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 RALYQ9UKM9 306 aaKnown RBP17.44■□□□□ 0.38
SMG6-212ENST00000573153 ATP8A1Q9Y2Q0 1164 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 MYLKQ15746 1914 aa17.44■□□□□ 0.38
SMG6-212ENST00000573153 GOLGA4Q13439 2230 aaKnown RBP17.44■□□□□ 0.38
SMG6-212ENST00000573153 NEMP1O14524 444 aa17.43■□□□□ 0.38
SMG6-212ENST00000573153 MFSD11O43934 449 aa17.43■□□□□ 0.38
SMG6-212ENST00000573153 GCATO75600 419 aa17.43■□□□□ 0.38
SMG6-212ENST00000573153 PROSCO94903 275 aa17.43■□□□□ 0.38
SMG6-212ENST00000573153 TMEM253P0C7T8 217 aa17.43■□□□□ 0.38
SMG6-212ENST00000573153 CKMT1AP12532 417 aa17.43■□□□□ 0.38
SMG6-212ENST00000573153 MAN1A1P33908 653 aa17.43■□□□□ 0.38
SMG6-212ENST00000573153 ELP6Q0PNE2 266 aa17.43■□□□□ 0.38
SMG6-212ENST00000573153 DPYSL3Q14195 570 aa17.43■□□□□ 0.38
SMG6-212ENST00000573153 HADHQ16836 314 aaKnown RBP17.43■□□□□ 0.38
SMG6-212ENST00000573153 NCBP2-AS2Q69YL0 99 aa17.43■□□□□ 0.38
SMG6-212ENST00000573153 TMCO3Q6UWJ1 677 aa17.43■□□□□ 0.38
SMG6-212ENST00000573153 CBARPQ8N350 705 aaPredicted RBP17.43■□□□□ 0.38
SMG6-212ENST00000573153 PCDH19Q8TAB3 1148 aa17.43■□□□□ 0.38
SMG6-212ENST00000573153 CXorf40AQ8TE69 158 aa17.43■□□□□ 0.38
SMG6-212ENST00000573153 APOLD1Q96LR9 279 aa17.43■□□□□ 0.38
SMG6-212ENST00000573153 CHP1Q99653 195 aa17.43■□□□□ 0.38
SMG6-212ENST00000573153 LRRC61Q9BV99 259 aa17.43■□□□□ 0.38
SMG6-212ENST00000573153 CLPBQ9H078 707 aa17.43■□□□□ 0.38
SMG6-212ENST00000573153 DSPP15924 2871 aaKnown RBP17.42■□□□□ 0.38
SMG6-212ENST00000573153 SHROOM3Q8TF72 1996 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 ANKRD11Q6UB99 2663 aaPredicted RBP17.42■□□□□ 0.38
SMG6-212ENST00000573153 CASC3O15234 703 aaKnown RBP17.42■□□□□ 0.38
SMG6-212ENST00000573153 CELA2BP08218 269 aaPredicted RBP17.42■□□□□ 0.38
SMG6-212ENST00000573153 SERPINB6P35237 376 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 LIG3P49916 1009 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 AP1S1P61966 158 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 HNRNPKP61978 463 aaKnown RBP eCLIP17.42■□□□□ 0.38
SMG6-212ENST00000573153 YPEL5P62699 121 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 TRAF2Q12933 501 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 TSR1Q2NL82 804 aaKnown RBP17.42■□□□□ 0.38
SMG6-212ENST00000573153 CDCP2Q5VXM1 449 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 MACC1Q6ZN28 852 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 DPPA4Q7L190 304 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 LRRC49Q8IUZ0 686 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 CNGA4Q8IV77 575 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 CACTIN-AS1Q8N1I8 211 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 TEX26Q8N6G2 289 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 PQLC3Q8N755 202 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 DCBLD1Q8N8Z6 715 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 PLA2G15Q8NCC3 412 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 TBATAQ96M53 351 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 CINPQ9BW66 212 aaPredicted RBP17.42■□□□□ 0.38
SMG6-212ENST00000573153 CCDC86Q9H6F5 360 aaKnown RBP17.42■□□□□ 0.38
SMG6-212ENST00000573153 CTTNBP2NLQ9P2B4 639 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 SEPT3Q9UH03 358 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 CSNK1G3Q9Y6M4 447 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 ITPR1Q14643 2758 aa17.42■□□□□ 0.38
SMG6-212ENST00000573153 CFAP69A5D8W1 941 aa17.41■□□□□ 0.38
SMG6-212ENST00000573153 TOR1BO14657 336 aa17.41■□□□□ 0.38
SMG6-212ENST00000573153 AKR1B10O60218 316 aa17.41■□□□□ 0.38
SMG6-212ENST00000573153 LZTS3O60299 673 aaPredicted RBP17.41■□□□□ 0.38
SMG6-212ENST00000573153 MTA2O94776 668 aa17.41■□□□□ 0.38
SMG6-212ENST00000573153 SERPINA4P29622 427 aa17.41■□□□□ 0.38
SMG6-212ENST00000573153 HSPA9P38646 679 aaKnown RBP17.41■□□□□ 0.38
SMG6-212ENST00000573153 RENBPP51606 427 aa17.41■□□□□ 0.38
SMG6-212ENST00000573153 CDH6P55285 790 aa17.41■□□□□ 0.38
SMG6-212ENST00000573153 PAFAH1B3Q15102 231 aaKnown RBP17.41■□□□□ 0.38
SMG6-212ENST00000573153 TCEAL1Q15170 157 aa17.41■□□□□ 0.38
SMG6-212ENST00000573153 LIPIQ6XZB0 460 aa17.41■□□□□ 0.38
SMG6-212ENST00000573153 PHACTR4Q8IZ21 702 aa17.41■□□□□ 0.38
SMG6-212ENST00000573153 MAML1Q92585 1016 aa17.41■□□□□ 0.38
SMG6-212ENST00000573153 NUDCD1Q96RS6 583 aa17.41■□□□□ 0.38
SMG6-212ENST00000573153 DEF6Q9H4E7 631 aa17.41■□□□□ 0.38
SMG6-212ENST00000573153 ATP13A3Q9H7F0 1226 aa17.41■□□□□ 0.38
SMG6-212ENST00000573153 NHEJ1Q9H9Q4 299 aaPredicted RBP17.41■□□□□ 0.38
SMG6-212ENST00000573153 GPSM3Q9Y4H4 160 aa17.41■□□□□ 0.38
SMG6-212ENST00000573153 ZFYVE26Q68DK2 2539 aa17.41■□□□□ 0.38
SMG6-212ENST00000573153 KNTC1P50748 2209 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 AQP9O43315 295 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 FZD6O60353 706 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 CDK4P11802 303 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 JUNDP17535 347 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 LHCGRP22888 699 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 SCNN1BP51168 640 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 ADKP55263 362 aaKnown RBP17.4■□□□□ 0.38
SMG6-212ENST00000573153 MAXP61244 160 aa17.4■□□□□ 0.38
SMG6-212ENST00000573153 CYP4F3Q08477 520 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms