RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 CCDC173Q0VFZ6 552 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 NOMO1Q15155 1222 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 MEI1Q5TIA1 1274 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 ALG1LQ6GMV1 187 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 BRAT1Q6PJG6 821 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 BZW1Q7L1Q6 419 aaKnown RBP15.94■□□□□ 0.14
CHD3-215ENST00000572750 TTC7BQ86TV6 843 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 CNTD1Q8N815 330 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 KDF1Q8NAX2 398 aaPredicted RBP15.94■□□□□ 0.14
CHD3-215ENST00000572750 TRIM58Q8NG06 486 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 C1orf216Q8TAB5 229 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 ACTL9Q8TC94 416 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 RAB7BQ96AH8 199 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 ECHDC3Q96DC8 303 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 AGAP3Q96P47 875 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 IL12RB2Q99665 862 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 MYOCQ99972 504 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 BRD8Q9H0E9 1235 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 TM9SF3Q9HD45 589 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 RXFP3Q9NSD7 469 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 SUSD2Q9UGT4 822 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 ZFR2Q9UPR6 939 aaKnown RBP15.94■□□□□ 0.14
CHD3-215ENST00000572750 EFR3BQ9Y2G0 817 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 TMEM131Q92545 1883 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 CACNA1EQ15878 2313 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 TRPM6Q9BX84 2022 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 CELSR3Q9NYQ7 3312 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 A0A1B0GTW7 788 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 A0A1W2PPC4 97 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 AREL1O15033 823 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 KHNYNO15037 678 aaKnown RBP15.93■□□□□ 0.14
CHD3-215ENST00000572750 SOCS5O75159 536 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 TJP3O95049 919 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 GNSP15586 552 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 XPAP23025 273 aaPredicted RBP15.93■□□□□ 0.14
CHD3-215ENST00000572750 IRX4P78413 519 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 NIPAL4Q0D2K0 466 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 IHHQ14623 411 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 RPS6KA1Q15418 735 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 UGP2Q16851 508 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 DUOXA1Q1HG43 343 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 ZNF284Q2VY69 593 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 AASDHQ4L235 1098 aaPredicted RBP15.93■□□□□ 0.14
CHD3-215ENST00000572750 TMEM259Q4ZIN3 620 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 SLC45A4Q5BKX6 768 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 SEL1L2Q5TEA6 688 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 SLC23A3Q6PIS1 610 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 UNQ6494/PRO21346Q6UXR6 183 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 HORMAD1Q86X24 394 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 REXO1L1PQ8IX06 675 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 WRAP53Q9BUR4 548 aaKnown RBP15.93■□□□□ 0.14
CHD3-215ENST00000572750 EDEM2Q9BV94 578 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 C10orf88Q9H8K7 445 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 CAPN10Q9HC96 672 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 FZD3Q9NPG1 666 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 PCDH12Q9NPG4 1184 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 HAUS2Q9NVX0 235 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 TRMT1Q9NXH9 659 aaKnown RBP15.93■□□□□ 0.14
CHD3-215ENST00000572750 AMACRQ9UHK6 382 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 PYCARDQ9ULZ3 195 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 ATP8A1Q9Y2Q0 1164 aa15.93■□□□□ 0.14
CHD3-215ENST00000572750 TCRBV7S2A1N4TA0A589 114 aa15.92■□□□□ 0.14
CHD3-215ENST00000572750 USP27XA6NNY8 438 aa15.92■□□□□ 0.14
CHD3-215ENST00000572750 WNT9AO14904 365 aa15.92■□□□□ 0.14
CHD3-215ENST00000572750 CPP00450 1065 aa15.92■□□□□ 0.14
CHD3-215ENST00000572750 SERPINF2P08697 491 aa15.92■□□□□ 0.14
CHD3-215ENST00000572750 PTPN3P26045 913 aa15.92■□□□□ 0.14
CHD3-215ENST00000572750 MMP12P39900 470 aa15.92■□□□□ 0.14
CHD3-215ENST00000572750 CD86P42081 329 aa15.92■□□□□ 0.14
CHD3-215ENST00000572750 AFF3P51826 1226 aaKnown RBP15.92■□□□□ 0.14
CHD3-215ENST00000572750 KLF1Q13351 362 aaPredicted RBP15.92■□□□□ 0.14
CHD3-215ENST00000572750 SETMARQ53H47 684 aaPredicted RBP15.92■□□□□ 0.14
CHD3-215ENST00000572750 RALGPS1Q5JS13 557 aa15.92■□□□□ 0.14
CHD3-215ENST00000572750 KIAA1161Q6NSJ0 714 aa15.92■□□□□ 0.14
CHD3-215ENST00000572750 NEK5Q6P3R8 708 aa15.92■□□□□ 0.14
CHD3-215ENST00000572750 RABEPKQ7Z6M1 372 aa15.92■□□□□ 0.14
CHD3-215ENST00000572750 CEP76Q8TAP6 659 aa15.92■□□□□ 0.14
CHD3-215ENST00000572750 ARRDC2Q8TBH0 407 aa15.92■□□□□ 0.14
CHD3-215ENST00000572750 SERAC1Q96JX3 654 aa15.92■□□□□ 0.14
CHD3-215ENST00000572750 NUSAP1Q9BXS6 441 aaKnown RBP15.92■□□□□ 0.14
CHD3-215ENST00000572750 WASF3Q9UPY6 502 aa15.92■□□□□ 0.14
CHD3-215ENST00000572750 CA5BQ9Y2D0 317 aa15.92■□□□□ 0.14
CHD3-215ENST00000572750 PCDHB9Q9Y5E1 797 aa15.92■□□□□ 0.14
CHD3-215ENST00000572750 RAI2Q9Y5P3 530 aa15.92■□□□□ 0.14
CHD3-215ENST00000572750 IGLON5A6NGN9 336 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 F5H423 210 aaPredicted RBP15.91■□□□□ 0.14
CHD3-215ENST00000572750 H7C0C1 242 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 KCNK3O14649 394 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 SLC31A1O15431 190 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 ZSCAN12O43309 604 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 HTRA2O43464 458 aaPredicted RBP15.91■□□□□ 0.14
CHD3-215ENST00000572750 TSPAN6O43657 245 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 PGLSO95336 258 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 MMP2P08253 660 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 ENGP17813 658 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 ATP5OP48047 213 aa15.91■□□□□ 0.14
CHD3-215ENST00000572750 CSNK1EP49674 416 aaKnown RBP15.91■□□□□ 0.14
CHD3-215ENST00000572750 EIF3EP60228 445 aaKnown RBP15.91■□□□□ 0.14
CHD3-215ENST00000572750 RPS21P63220 83 aaKnown RBP15.91■□□□□ 0.14
CHD3-215ENST00000572750 ELP6Q0PNE2 266 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms