RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 H3BM21 787 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 DFFAO00273 331 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 PRPSAP2O60256 369 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 LZTS3O60299 673 aaPredicted RBP18.24■□□□□ 0.51
CHD3-214ENST00000572579 CSO75390 466 aaKnown RBP18.24■□□□□ 0.51
CHD3-214ENST00000572579 AMPD1P23109 780 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 SUOXP51687 545 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 THOP1P52888 689 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 PTK2BQ14289 1009 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 AGERQ15109 404 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 TCEA2Q15560 299 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 TBC1D25Q3MII6 688 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 FAXCQ5TGI0 409 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 BRAT1Q6PJG6 821 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 POLNQ7Z5Q5 900 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 LUZP1Q86V48 1076 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 PSTKQ8IV42 348 aaKnown RBP18.24■□□□□ 0.51
CHD3-214ENST00000572579 PGBD5Q8N414 524 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 MAPK15Q8TD08 544 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 BTBD6Q96KE9 485 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 TUBGCP5Q96RT8 1024 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 EIF3CQ99613 913 aaKnown RBP18.24■□□□□ 0.51
CHD3-214ENST00000572579 NCAPGQ9BPX3 1015 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 APOOQ9BUR5 198 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 EDEM3Q9BZQ6 932 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 PRORYQ9H606 182 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 CBX8Q9HC52 389 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 ATP8A1Q9Y2Q0 1164 aa18.24■□□□□ 0.51
CHD3-214ENST00000572579 USP12O75317 370 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 RNF8O76064 485 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 IL4RP24394 825 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 PCK1P35558 622 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 DUSP3P51452 185 aaPredicted RBP18.23■□□□□ 0.51
CHD3-214ENST00000572579 PPARDQ03181 441 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 IL10RBQ08334 325 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 NSUN2Q08J23 767 aaKnown RBP eCLIP18.23■□□□□ 0.51
CHD3-214ENST00000572579 ELP6Q0PNE2 266 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 PTPRRQ15256 657 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 DPYSL2Q16555 572 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 SMTNL2Q2TAL5 461 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 FILIP1LQ4L180 1135 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 FIGNQ5HY92 759 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 PPP1R2P3Q6NXS1 205 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 LIPIQ6XZB0 460 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 CPNE8Q86YQ8 564 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 SFTPA2Q8IWL1 248 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 BTN2A2Q8WVV5 523 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 PRR11Q96HE9 360 aaPredicted RBP18.23■□□□□ 0.51
CHD3-214ENST00000572579 HIC2Q96JB3 615 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 TBATAQ96M53 351 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 IL12RB2Q99665 862 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 RABGEF1Q9UJ41 708 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 PTPRQQ9UMZ3 2332 aa18.23■□□□□ 0.51
CHD3-214ENST00000572579 BAHCC1Q9P281 2608 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 A8MX80 341 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 TOR1BO14657 336 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 DAPK3O43293 454 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 RARAP10276 462 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 CR2P20023 1033 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 XPAP23025 273 aaPredicted RBP18.22■□□□□ 0.51
CHD3-214ENST00000572579 PEX5P50542 639 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 SCNN1BP51168 640 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 HK3P52790 923 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 PDX1P52945 283 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 FANCCQ00597 558 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 GRM3Q14832 879 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 NR0B2Q15466 257 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 ISXQ2M1V0 245 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 C6orf132Q5T0Z8 1188 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 ENPP7Q6UWV6 458 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 HID1Q8IV36 788 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 CSPG4P5Q96PW8 444 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 PSKH2Q96QS6 385 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 C1QTNF7Q9BXJ2 289 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 SLC13A1Q9BZW2 595 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 THAP2Q9H0W7 228 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 ASCL3Q9NQ33 180 aa18.22■□□□□ 0.51
CHD3-214ENST00000572579 COL27A1Q8IZC6 1860 aaPredicted RBP18.21■□□□□ 0.51
CHD3-214ENST00000572579 SYCE3A1L190 88 aa18.21■□□□□ 0.51
CHD3-214ENST00000572579 TMEM202A6NGA9 273 aa18.21■□□□□ 0.51
CHD3-214ENST00000572579 MAFKO60675 156 aa18.21■□□□□ 0.51
CHD3-214ENST00000572579 RECQL5O94762 991 aaPredicted RBP18.21■□□□□ 0.51
CHD3-214ENST00000572579 PCCBP05166 539 aa18.21■□□□□ 0.51
CHD3-214ENST00000572579 ABCG1P45844 678 aa18.21■□□□□ 0.51
CHD3-214ENST00000572579 LSSP48449 732 aa18.21■□□□□ 0.51
CHD3-214ENST00000572579 SLC25A11Q02978 314 aaKnown RBP18.21■□□□□ 0.51
CHD3-214ENST00000572579 TLE3Q04726 772 aa18.21■□□□□ 0.51
CHD3-214ENST00000572579 IHHQ14623 411 aa18.21■□□□□ 0.51
CHD3-214ENST00000572579 NFATC4Q14934 902 aa18.21■□□□□ 0.51
CHD3-214ENST00000572579 CBARPQ8N350 705 aaPredicted RBP18.21■□□□□ 0.51
CHD3-214ENST00000572579 OR1E3Q8WZA6 343 aa18.21■□□□□ 0.51
CHD3-214ENST00000572579 ATXN7L3BQ96GX2 97 aa18.21■□□□□ 0.51
CHD3-214ENST00000572579 DEPDC7Q96QD5 511 aa18.21■□□□□ 0.51
CHD3-214ENST00000572579 CINPQ9BW66 212 aaPredicted RBP18.21■□□□□ 0.51
CHD3-214ENST00000572579 LGR4Q9BXB1 951 aa18.21■□□□□ 0.51
CHD3-214ENST00000572579 ABCG4Q9H172 646 aa18.21■□□□□ 0.51
CHD3-214ENST00000572579 ATP13A3Q9H7F0 1226 aa18.21■□□□□ 0.51
CHD3-214ENST00000572579 ZWILCHQ9H900 591 aa18.21■□□□□ 0.51
CHD3-214ENST00000572579 SP110Q9HB58 689 aa18.21■□□□□ 0.51
CHD3-214ENST00000572579 DONSONQ9NYP3 566 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms