RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 RDH14Q9HBH5 336 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 ACP6Q9NPH0 428 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 PPARGC1AQ9UBK2 798 aaKnown RBP11.44□□□□□ -0.58
CHMP6-202ENST00000571457 PLEKHB1Q9UF11 243 aaPredicted RBP11.44□□□□□ -0.58
CHMP6-202ENST00000571457 PCDHGC3Q9UN70 934 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 PLAAQ9Y263 795 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 CHD5Q8TDI0 1954 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 CACNA1DQ01668 2161 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 ZSCAN5CA6NGD5 496 aaPredicted RBP11.43□□□□□ -0.58
CHMP6-202ENST00000571457 B4DGG1 531 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 CACNB4O00305 520 aaPredicted RBP11.43□□□□□ -0.58
CHMP6-202ENST00000571457 GNA14O95837 355 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 ERBB2P04626 1255 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 TIMP2P16035 220 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 KRT9P35527 623 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 ACVRL1P37023 503 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 PPP1R2P41236 205 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 KLRB1Q12918 225 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 MTM1Q13496 603 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 PKP1Q13835 747 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 AMZ1Q400G9 498 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 TMEM52BQ4KMG9 183 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 LACTB2Q53H82 288 aaPredicted RBP11.43□□□□□ -0.58
CHMP6-202ENST00000571457 SPECC1LQ69YQ0 1117 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 SMYD5Q6GMV2 418 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 TMPRSS9Q7Z410 1059 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 TRIM59Q8IWR1 403 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 AGBL5Q8NDL9 886 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 APOBEC4Q8WW27 367 aaKnown RBP11.43□□□□□ -0.58
CHMP6-202ENST00000571457 PDXPQ96GD0 296 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 SCAND2PQ9GZW5 306 aaPredicted RBP11.43□□□□□ -0.58
CHMP6-202ENST00000571457 MAGEH1Q9H213 219 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 TMPRSS4Q9NRS4 437 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 OR1A2Q9Y585 309 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.43□□□□□ -0.58
CHMP6-202ENST00000571457 ACTL7AQ9Y615 435 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 LRP4O75096 1905 aa11.43□□□□□ -0.58
CHMP6-202ENST00000571457 CELSR2Q9HCU4 2923 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 RHPN2P1A8MT19 583 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 TNFRSF10CO14798 259 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 B4GAT1O43505 415 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 IGSF6O95976 241 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 FGF3P11487 239 aaPredicted RBP11.42□□□□□ -0.58
CHMP6-202ENST00000571457 TFE3P19532 575 aaPredicted RBP11.42□□□□□ -0.58
CHMP6-202ENST00000571457 ALDH4A1P30038 563 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 CSTF2P33240 577 aaKnown RBP eCLIP11.42□□□□□ -0.58
CHMP6-202ENST00000571457 MAPKAPK2P49137 400 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 RAB15P59190 212 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 B4GALNT1Q00973 533 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 MC1RQ01726 317 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 PTK2Q05397 1052 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 BIRC2Q13490 618 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 AGERQ15109 404 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 TSR1Q2NL82 804 aaKnown RBP11.42□□□□□ -0.58
CHMP6-202ENST00000571457 PTPN20Q4JDL3 420 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 ATXN7L2Q5T6C5 722 aaPredicted RBP11.42□□□□□ -0.58
CHMP6-202ENST00000571457 ERAP2Q6P179 960 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 RCBTB1Q8NDN9 531 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 OR56A4Q8NGH8 313 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 HCAR2Q8TDS4 363 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 CASKIN2Q8WXE0 1202 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 ART4Q93070 314 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 SMARCE1Q969G3 411 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 SNX21Q969T3 373 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 ABHD17AQ96GS6 310 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 TBCBQ99426 244 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 DPYSL5Q9BPU6 564 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 TTYH3Q9C0H2 523 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 GOLPH3LQ9H4A5 285 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 GPN2Q9H9Y4 310 aaPredicted RBP11.42□□□□□ -0.58
CHMP6-202ENST00000571457 COQ6Q9Y2Z9 468 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 MFHAS1Q9Y4C4 1052 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 B3GALT1Q9Y5Z6 326 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 POLQO75417 2590 aa11.42□□□□□ -0.58
CHMP6-202ENST00000571457 IGHV5-10-1A0A0J9YXX1 117 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 PRR19A6NJB7 356 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 PDE2AO00408 941 aaPredicted RBP11.41□□□□□ -0.58
CHMP6-202ENST00000571457 NKX2-8O15522 239 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 RAD1O60671 282 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 RAMP2O60895 175 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 AGFG2O95081 481 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 PCCBP05166 539 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 ITIH2P19823 946 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 SCNN1AP37088 669 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 GPR3P46089 330 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 LIMK2P53671 638 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 OR1D5P58170 312 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 KIAA1024LP59773 190 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 ARHGAP44Q17R89 818 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 ARTNQ5T4W7 220 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 DCAF12Q5T6F0 453 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 FOXR2Q6PJQ5 311 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 ZNF438Q7Z4V0 828 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 OR1E3Q8WZA6 343 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 VOPP1Q96AW1 172 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 HMCESQ96FZ2 354 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 CCDC74BQ96LY2 380 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 TEFMQ96QE5 360 aaKnown RBP11.41□□□□□ -0.58
CHMP6-202ENST00000571457 NUDT22Q9BRQ3 303 aa11.41□□□□□ -0.58
CHMP6-202ENST00000571457 TMEM168Q9H0V1 697 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms