RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 CEP97Q8IW35 865 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 CFAP52Q8N1V2 620 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 BMPERQ8N8U9 685 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 FDCSPQ8NFU4 85 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 DNAJB8Q8NHS0 232 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 CHTF18Q8WVB6 975 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 EDEM1Q92611 657 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 TSACCQ96A04 125 aaPredicted RBP7.01□□□□□ -1.29
CHD3-213ENST00000571249 SYAP1Q96A49 352 aaPredicted RBP7.01□□□□□ -1.29
CHD3-213ENST00000571249 CENPTQ96BT3 561 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 PRICKLE1Q96MT3 831 aaPredicted RBP7.01□□□□□ -1.29
CHD3-213ENST00000571249 FOXC2Q99958 501 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 STRA6Q9BX79 667 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 SGPP1Q9BX95 441 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 IRX2Q9BZI1 471 aaPredicted RBP7.01□□□□□ -1.29
CHD3-213ENST00000571249 EDEM3Q9BZQ6 932 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 MRPL44Q9H9J2 332 aaKnown RBP7.01□□□□□ -1.29
CHD3-213ENST00000571249 GRPEL1Q9HAV7 217 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 DYRK4Q9NR20 520 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 TBC1D7Q9P0N9 293 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 TMEM9Q9P0T7 183 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 RCOR1Q9UKL0 485 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 NOL7Q9UMY1 257 aaKnown RBP7.01□□□□□ -1.29
CHD3-213ENST00000571249 PRKAB1Q9Y478 270 aa7.01□□□□□ -1.29
CHD3-213ENST00000571249 ANK3Q12955 4377 aaKnown RBP7.01□□□□□ -1.29
CHD3-213ENST00000571249 SVEP1Q4LDE5 3571 aa7□□□□□ -1.29
CHD3-213ENST00000571249 TYW5A2RUC4 315 aaKnown RBP7□□□□□ -1.29
CHD3-213ENST00000571249 A6NL46 340 aa7□□□□□ -1.29
CHD3-213ENST00000571249 B4E171 279 aa7□□□□□ -1.29
CHD3-213ENST00000571249 H3BQV1 296 aa7□□□□□ -1.29
CHD3-213ENST00000571249 EIF1AYO14602 144 aaKnown RBP7□□□□□ -1.29
CHD3-213ENST00000571249 ACSL4O60488 711 aa7□□□□□ -1.29
CHD3-213ENST00000571249 CREG1O75629 220 aa7□□□□□ -1.29
CHD3-213ENST00000571249 DLGAP3O95886 979 aa7□□□□□ -1.29
CHD3-213ENST00000571249 STSP08842 583 aa7□□□□□ -1.29
CHD3-213ENST00000571249 CD1CP29017 333 aa7□□□□□ -1.29
CHD3-213ENST00000571249 ALDH4A1P30038 563 aa7□□□□□ -1.29
CHD3-213ENST00000571249 PRPHP41219 470 aa7□□□□□ -1.29
CHD3-213ENST00000571249 TSPAN7P41732 249 aa7□□□□□ -1.29
CHD3-213ENST00000571249 SCTRP47872 440 aa7□□□□□ -1.29
CHD3-213ENST00000571249 SLC11A2P49281 568 aa7□□□□□ -1.29
CHD3-213ENST00000571249 MEOX1P50221 254 aa7□□□□□ -1.29
CHD3-213ENST00000571249 LIMK2P53671 638 aa7□□□□□ -1.29
CHD3-213ENST00000571249 ADAM8P78325 824 aa7□□□□□ -1.29
CHD3-213ENST00000571249 Q0VFX4 171 aa7□□□□□ -1.29
CHD3-213ENST00000571249 RAPSNQ13702 412 aa7□□□□□ -1.29
CHD3-213ENST00000571249 DLG2Q15700 870 aa7□□□□□ -1.29
CHD3-213ENST00000571249 CEBPEQ15744 281 aa7□□□□□ -1.29
CHD3-213ENST00000571249 CHRNA6Q15825 494 aa7□□□□□ -1.29
CHD3-213ENST00000571249 EDRF1Q3B7T1 1238 aa7□□□□□ -1.29
CHD3-213ENST00000571249 ANO6Q4KMQ2 910 aa7□□□□□ -1.29
CHD3-213ENST00000571249 ZNF667Q5HYK9 610 aa7□□□□□ -1.29
CHD3-213ENST00000571249 KCTD16Q68DU8 428 aa7□□□□□ -1.29
CHD3-213ENST00000571249 NADSYN1Q6IA69 706 aa7□□□□□ -1.29
CHD3-213ENST00000571249 KIAA1161Q6NSJ0 714 aa7□□□□□ -1.29
CHD3-213ENST00000571249 ERN2Q76MJ5 926 aaKnown RBP7□□□□□ -1.29
CHD3-213ENST00000571249 BRAPQ7Z569 592 aa7□□□□□ -1.29
CHD3-213ENST00000571249 HID1Q8IV36 788 aa7□□□□□ -1.29
CHD3-213ENST00000571249 RNF139Q8WU17 664 aa7□□□□□ -1.29
CHD3-213ENST00000571249 CCDC127Q96BQ5 260 aa7□□□□□ -1.29
CHD3-213ENST00000571249 CYFIP2Q96F07 1278 aa7□□□□□ -1.29
CHD3-213ENST00000571249 SEC16BQ96JE7 1060 aa7□□□□□ -1.29
CHD3-213ENST00000571249 FEM1CQ96JP0 617 aa7□□□□□ -1.29
CHD3-213ENST00000571249 LENG8Q96PV6 779 aaPredicted RBP7□□□□□ -1.29
CHD3-213ENST00000571249 TEFMQ96QE5 360 aaKnown RBP7□□□□□ -1.29
CHD3-213ENST00000571249 TMEM121Q9BTD3 319 aa7□□□□□ -1.29
CHD3-213ENST00000571249 ING2Q9H160 280 aa7□□□□□ -1.29
CHD3-213ENST00000571249 TRIT1Q9H3H1 467 aaKnown RBP7□□□□□ -1.29
CHD3-213ENST00000571249 PRDM9Q9NQV7 894 aa7□□□□□ -1.29
CHD3-213ENST00000571249 ACSS2Q9NR19 701 aa7□□□□□ -1.29
CHD3-213ENST00000571249 OLA1Q9NTK5 396 aaKnown RBP7□□□□□ -1.29
CHD3-213ENST00000571249 BLOC1S4Q9NUP1 217 aa7□□□□□ -1.29
CHD3-213ENST00000571249 CFAP45Q9UL16 551 aa7□□□□□ -1.29
CHD3-213ENST00000571249 TMEM184BQ9Y519 407 aaPredicted RBP7□□□□□ -1.29
CHD3-213ENST00000571249 MGAM2Q2M2H8 2515 aa7□□□□□ -1.29
CHD3-213ENST00000571249 MYH11P35749 1972 aa7□□□□□ -1.29
CHD3-213ENST00000571249 CACNA1CQ13936 2221 aa6.99□□□□□ -1.29
CHD3-213ENST00000571249 A0A1B0GUH1 482 aa6.99□□□□□ -1.29
CHD3-213ENST00000571249 IGLON5A6NGN9 336 aa6.99□□□□□ -1.29
CHD3-213ENST00000571249 PHACTR2O75167 634 aa6.99□□□□□ -1.29
CHD3-213ENST00000571249 GCNT3O95395 438 aa6.99□□□□□ -1.29
CHD3-213ENST00000571249 LY6G6DO95868 133 aa6.99□□□□□ -1.29
CHD3-213ENST00000571249 ZNF28P17035 718 aa6.99□□□□□ -1.29
CHD3-213ENST00000571249 CHRNA3P32297 505 aa6.99□□□□□ -1.29
CHD3-213ENST00000571249 EIF4A3P38919 411 aaKnown RBP6.99□□□□□ -1.29
CHD3-213ENST00000571249 NOP2P46087 812 aaKnown RBP6.99□□□□□ -1.29
CHD3-213ENST00000571249 GLRBP48167 497 aa6.99□□□□□ -1.29
CHD3-213ENST00000571249 TOB1P50616 345 aaPredicted RBP6.99□□□□□ -1.29
CHD3-213ENST00000571249 BLKP51451 505 aa6.99□□□□□ -1.29
CHD3-213ENST00000571249 HK3P52790 923 aa6.99□□□□□ -1.29
CHD3-213ENST00000571249 PSMA6P60900 246 aaKnown RBP6.99□□□□□ -1.29
CHD3-213ENST00000571249 SULT2A1Q06520 285 aa6.99□□□□□ -1.29
CHD3-213ENST00000571249 TRA2AQ13595 282 aaKnown RBP eCLIP6.99□□□□□ -1.29
CHD3-213ENST00000571249 ZNF699Q32M78 642 aa6.99□□□□□ -1.29
CHD3-213ENST00000571249 LINC01559Q495D7 138 aa6.99□□□□□ -1.29
CHD3-213ENST00000571249 CCDC183Q5T5S1 534 aa6.99□□□□□ -1.29
CHD3-213ENST00000571249 OGFOD3Q6PK18 319 aa6.99□□□□□ -1.29
CHD3-213ENST00000571249 MACC1Q6ZN28 852 aa6.99□□□□□ -1.29
CHD3-213ENST00000571249 UNC93AQ86WB7 457 aa6.99□□□□□ -1.29
CHD3-213ENST00000571249 SLC9A9Q8IVB4 645 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms