RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 MPOP05164 745 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 FAM228BP0C875 321 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 MYBL1P10243 752 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 TSHRP16473 764 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 TGM2P21980 687 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 SERPINA4P29622 427 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 PPARDQ03181 441 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 BCL2L1Q07817 233 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 IL10RBQ08334 325 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 INPP5AQ14642 412 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 PTPRRQ15256 657 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 PERM1Q5SV97 790 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 DCBLD1Q8N8Z6 715 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 PDCD6IPQ8WUM4 868 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 RFFLQ8WZ73 363 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 TRIM11Q96F44 468 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 ZNF641Q96N77 438 aaPredicted RBP12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 DUSP23Q9BVJ7 150 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 NUP85Q9BW27 656 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 C1QTNF7Q9BXJ2 289 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 SLC13A1Q9BZW2 595 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 ATP13A3Q9H7F0 1226 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 SYNDIG1Q9H7V2 258 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 DONSONQ9NYP3 566 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 SIRPGQ9P1W8 387 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 GULP1Q9UBP9 304 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 ANAPC7Q9UJX3 599 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 ADAMTS20P59510 1910 aa12.31□□□□□ -0.44
GTF3C1-208ENST00000567843 NBEAQ8NFP9 2946 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 EIF3CLB5ME19 914 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 GOLGA6L19H0YKK7 550 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 YY2O15391 372 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 CSO75390 466 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 RECQL5O94762 991 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 SERPING1P05155 500 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 ANXA6P08133 673 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 PCK1P35558 622 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 MMP12P39900 470 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 ARL4AP40617 200 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 EIF2S3P41091 472 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 DUSP3P51452 185 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 MAXP61244 160 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 YPEL5P62699 121 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 RALGDSQ12967 914 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 MMRN1Q13201 1228 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 ZNF235Q14590 738 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 LBRQ14739 615 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 RTP5Q14D33 572 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 DPYSL2Q16555 572 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 ALG11Q2TAA5 492 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 ATP13A4Q4VNC1 1196 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 BOLA3Q53S33 107 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 FIGNQ5HY92 759 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 CCDC122Q5T0U0 273 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 CDCP2Q5VXM1 449 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 DENND2CQ68D51 928 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 ZCCHC8Q6NZY4 707 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 BRAT1Q6PJG6 821 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 MACC1Q6ZN28 852 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 POLNQ7Z5Q5 900 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 SLC35F3Q8IY50 421 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 FAM181AQ8N9Y4 354 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 BTN2A2Q8WVV5 523 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 NAF1Q96HR8 494 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 CSPG4P5Q96PW8 444 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 TUBGCP5Q96RT8 1024 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 EIF3CQ99613 913 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 APOOQ9BUR5 198 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 NRSN2Q9GZP1 204 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 SUDS3Q9H7L9 328 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 PCDH18Q9HCL0 1135 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 SEPT3Q9UH03 358 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 DOLKQ9UPQ8 538 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 LUC7L2Q9Y383 392 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 PCDHGC4Q9Y5F7 938 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 CSNK1G3Q9Y6M4 447 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 MYLKQ15746 1914 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 IGSF10Q6WRI0 2623 aa12.3□□□□□ -0.44
GTF3C1-208ENST00000567843 A0A0U1RQS6 177 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 A0A1W2PQJ5 194 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 USP12O75317 370 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 MAP3K6O95382 1288 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 GYPCP04921 128 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 CD48P09326 243 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 CTSEP14091 401 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 CASP14P31944 242 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 CSNK1DP48730 415 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 HCAR3P49019 387 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 CDH6P55285 790 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 ZBED6P86452 979 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 CCDC173Q0VFZ6 552 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 PIGHQ14442 188 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 KRT81Q14533 505 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 GRM3Q14832 879 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 ACOX1Q15067 660 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 NR0B2Q15466 257 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 TMCO4Q5TGY1 634 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 ALKBH5Q6P6C2 394 aaKnown RBP12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 FOXR1Q6PIV2 292 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms