RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 ING3Q9NXR8 418 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 ABI2Q9NYB9 513 aaPredicted RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 TAS2R14Q9NYV8 317 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 CLIC5Q9NZA1 410 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 CDH22Q9UJ99 828 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 E2F8A0AVK6 867 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 CCDC182A6NF36 153 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 AQP12BA6NM10 295 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 SNPHO15079 494 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 CCNT2O60583 730 aaKnown RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 ULK1O75385 1050 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 NOL4O94818 638 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 LRIG2O94898 1065 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 SCELO95171 688 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 CPSF4O95639 269 aaKnown RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 ADRB2P07550 413 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 HMBSP08397 361 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 INSRRP14616 1297 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 PTGIRP43119 386 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 RHBDL3P58872 404 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 CACNB2Q08289 660 aaPredicted RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 DLG1Q12959 904 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 MTM1Q13496 603 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 QPRTQ15274 297 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 SMAD1Q15797 465 aaKnown RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 RNASEH2BQ5TBB1 312 aaKnown RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 ERAP2Q6P179 960 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 PSRC1Q6PGN9 363 aaPredicted RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 LCLAT1Q6UWP7 414 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 GPRIN3Q6ZVF9 776 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 GLT6D1Q7Z4J2 308 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 AQP12AQ8IXF9 295 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 NIPA2Q8N8Q9 360 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 PIK3C3Q8NEB9 887 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 GRPEL2Q8TAA5 225 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 RAB2BQ8WUD1 216 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 IRGQQ8WZA9 623 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 CENPNQ96H22 339 aaPredicted RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 TDRD1Q9BXT4 1180 aaKnown RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 RIBC2Q9H4K1 309 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 RPS6KB2Q9UBS0 482 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 NUDT5Q9UKK9 219 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 FBXO5Q9UKT4 447 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 PSME2Q9UL46 239 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 CLCA2Q9UQC9 943 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 PCDHB12Q9Y5F1 795 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 PCDHB1Q9Y5F3 818 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 NUP188Q5SRE5 1749 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 A0A0G2JLL6 359 aaPredicted RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 CCDC189A1A4V9 331 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 MOXD2PA6NHM9 499 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 BTN3A1O00481 513 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 IRF6O14896 467 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 HAT1O14929 419 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 IDH3BO43837 385 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 WBP4O75554 376 aaKnown RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 ECDO95905 644 aaPredicted RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 LRG1P02750 347 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 PRKAR1AP10644 381 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 YWHAQP27348 245 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 GSTM5P46439 218 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 ALDH7A1P49419 539 aaKnown RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 ACTR3P61158 418 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 GRIK4Q16099 956 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 QPCTQ16769 361 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 ASTE1Q2TB18 679 aaPredicted RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 CTXN3Q4LDR2 81 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 CMPK2Q5EBM0 449 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 ARMC12Q5T9G4 340 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 TYW3Q6IPR3 259 aaKnown RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 TRIM40Q6P9F5 258 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 IL27RAQ6UWB1 636 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 CYP2R1Q6VVX0 501 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 CATSPERGQ6ZRH7 1159 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 THAP5Q7Z6K1 395 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 PRRT2Q7Z6L0 340 aaPredicted RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 DDX53Q86TM3 631 aaKnown RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 EPHX4Q8IUS5 362 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 SYT12Q8IV01 421 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 GIPC3Q8TF64 312 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 ZNF296Q8WUU4 475 aaPredicted RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 NELL1Q92832 810 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 OMA1Q96E52 524 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 TSEN34Q9BSV6 310 aaKnown RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 HDHD2Q9H0R4 259 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 NOL6Q9H6R4 1146 aaKnown RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 ARL8BQ9NVJ2 186 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 DMAC2Q9NW81 257 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 SMPD3Q9NY59 655 aaPredicted RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 TMEM9Q9P0T7 183 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 OR12D3Q9UGF7 316 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 VPS28Q9UK41 221 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 PADI4Q9UM07 663 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 ITM2BQ9Y287 266 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 FADS3Q9Y5Q0 445 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 LAMB4A4D0S4 1761 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 PRR5-ARHGAP8B1AHC4 643 aa4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 RNASEH1O60930 286 aaKnown RBP4.37□□□□□ -1.71
LPCAT2-208ENST00000566915 DNAJB5O75953 348 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms