RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 SP3Q02447 781 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 PCLAFQ15004 111 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 PPM1LQ5SGD2 360 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 TTC33Q6PID6 262 aaPredicted RBP11.65□□□□□ -0.54
CDH1-210ENST00000566612 MAMDC4Q6UXC1 1216 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 ZYG11AQ6WRX3 759 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 AGMOQ6ZNB7 445 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 LRRC49Q8IUZ0 686 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 NPWQ8N729 165 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 OR4K2Q8NGD2 314 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 RDH11Q8TC12 318 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 TMEM79Q9BSE2 394 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 PLK2Q9NYY3 685 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 EGFL7Q9UHF1 273 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 PCDHB9Q9Y5E1 797 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 MYADML2A6NDP7 307 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 MOXD2PA6NHM9 499 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 SEPT4O43236 478 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 IPO13O94829 963 aaKnown RBP11.65□□□□□ -0.54
CDH1-210ENST00000566612 PRKCGP05129 697 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 NELFEP18615 380 aaKnown RBP11.65□□□□□ -0.54
CDH1-210ENST00000566612 FRG1Q14331 258 aaKnown RBP11.65□□□□□ -0.54
CDH1-210ENST00000566612 AARS2Q5JTZ9 985 aaKnown RBP11.65□□□□□ -0.54
CDH1-210ENST00000566612 OTUD3Q5T2D3 398 aaPredicted RBP11.65□□□□□ -0.54
CDH1-210ENST00000566612 HECTD3Q5T447 861 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 RNF220Q5VTB9 566 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 LINGO4Q6UY18 593 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 MFN1Q8IWA4 741 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 MIER2Q8N344 545 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 OR4L1Q8NH43 312 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 STAG3L4Q8TBR4 150 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 DNAJC1Q96KC8 554 aaKnown RBP11.65□□□□□ -0.54
CDH1-210ENST00000566612 MIPEPQ99797 713 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 SLC25A51Q9H1U9 297 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 HMX1Q9NP08 348 aaPredicted RBP11.65□□□□□ -0.54
CDH1-210ENST00000566612 DNAJC28Q9NX36 388 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 MOCS1Q9NZB8 636 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 DNMT3LQ9UJW3 386 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 PCDHGC4Q9Y5F7 938 aa11.65□□□□□ -0.54
CDH1-210ENST00000566612 BHMG1C9JSJ3 638 aaPredicted RBP11.65□□□□□ -0.55
CDH1-210ENST00000566612 T-ENOLP0DO92 83 aa11.65□□□□□ -0.55
CDH1-210ENST00000566612 ATP6AP1LQ52LC2 224 aa11.65□□□□□ -0.55
CDH1-210ENST00000566612 TNFAIP8L3Q5GJ75 292 aa11.65□□□□□ -0.55
CDH1-210ENST00000566612 MBLAC2Q68D91 279 aa11.65□□□□□ -0.55
CDH1-210ENST00000566612 UGT3A1Q6NUS8 523 aa11.65□□□□□ -0.55
CDH1-210ENST00000566612 GPSM1Q86YR5 675 aa11.65□□□□□ -0.55
CDH1-210ENST00000566612 CDYL2Q8N8U2 506 aa11.65□□□□□ -0.55
CDH1-210ENST00000566612 MRPS31Q92665 395 aaKnown RBP11.65□□□□□ -0.55
CDH1-210ENST00000566612 ESAMQ96AP7 390 aa11.65□□□□□ -0.55
CDH1-210ENST00000566612 SKA1Q96BD8 255 aa11.65□□□□□ -0.55
CDH1-210ENST00000566612 C1orf50Q9BV19 199 aa11.65□□□□□ -0.55
CDH1-210ENST00000566612 POMPQ9Y244 141 aa11.65□□□□□ -0.55
CDH1-210ENST00000566612 EVPLQ92817 2033 aa11.65□□□□□ -0.55
CDH1-210ENST00000566612 HSPA1AP0DMV8 641 aaKnown RBP11.64□□□□□ -0.55
CDH1-210ENST00000566612 HSPA1BP0DMV9 641 aaKnown RBP11.64□□□□□ -0.55
CDH1-210ENST00000566612 SLC2A4P14672 509 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 RHOQP17081 205 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 TUFMP49411 452 aaKnown RBP11.64□□□□□ -0.55
CDH1-210ENST00000566612 PHEXP78562 749 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 FAM45BPQ6NSW5 357 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 FRMD7Q6ZUT3 714 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 MYO1HQ8N1T3 1032 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 FAM45AQ8TCE6 357 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 RTKNQ9BST9 563 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 MLPHQ9BV36 600 aaPredicted RBP11.64□□□□□ -0.55
CDH1-210ENST00000566612 PKD2L2Q9NZM6 624 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 AP4S1Q9Y587 144 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 TRAFD1O14545 582 aaPredicted RBP11.64□□□□□ -0.55
CDH1-210ENST00000566612 FGF3P11487 239 aaPredicted RBP11.64□□□□□ -0.55
CDH1-210ENST00000566612 ITGALP20701 1170 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 IL2P60568 153 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 STXBP5Q5T5C0 1151 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 ZC3HC1Q86WB0 502 aaKnown RBP11.64□□□□□ -0.55
CDH1-210ENST00000566612 VPS45Q9NRW7 570 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 PPM1HQ9ULR3 514 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 TIMM22Q9Y584 194 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 A0A0U1RQF3 1178 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 URODP06132 367 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 SPATA31D3P0C874 917 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 PEX2P28328 305 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 PSEN1P49768 467 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 SLC7A2P52569 658 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 GALNT2Q10471 571 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 HNRNPDQ14103 355 aaKnown RBP11.64□□□□□ -0.55
CDH1-210ENST00000566612 SAMD4BQ5PRF9 694 aaKnown RBP11.64□□□□□ -0.55
CDH1-210ENST00000566612 RBM20Q5T481 1227 aaKnown RBP11.64□□□□□ -0.55
CDH1-210ENST00000566612 SPATA31D4Q6ZUB0 917 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 ASRGL1Q7L266 308 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 EFL1Q7Z2Z2 1120 aaKnown RBP11.64□□□□□ -0.55
CDH1-210ENST00000566612 SZRD1Q7Z422 152 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 C14orf80Q86SX3 495 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 FCRL5Q96RD9 977 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 HBEGFQ99075 208 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 OXCT2Q9BYC2 517 aaPredicted RBP11.64□□□□□ -0.55
CDH1-210ENST00000566612 MTMR10Q9NXD2 777 aa11.64□□□□□ -0.55
CDH1-210ENST00000566612 HOXA2O43364 376 aa11.63□□□□□ -0.55
CDH1-210ENST00000566612 ETV4P43268 484 aa11.63□□□□□ -0.55
CDH1-210ENST00000566612 PDK3Q15120 406 aa11.63□□□□□ -0.55
CDH1-210ENST00000566612 CYP51A1Q16850 503 aa11.63□□□□□ -0.55
CDH1-210ENST00000566612 AASDHQ4L235 1098 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms