RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 SLC7A1P30825 629 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 RECQLP46063 649 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 BAG6P46379 1132 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 SERPINB9P50453 376 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 VAC14Q08AM6 782 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 NME3Q13232 169 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CARTPTQ16568 116 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 FBXO30Q8TB52 745 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PNPT1Q8TCS8 783 aaKnown RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 ASB12Q8WXK4 309 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PIGKQ92643 395 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 KLHL32Q96NJ5 620 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 SORT1Q99523 831 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 DCP1AQ9NPI6 582 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 TIGARQ9NQ88 270 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 COA3Q9Y2R0 106 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 FARP1Q9Y4F1 1045 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 RIMBP3CA6NJZ7 1639 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 RIMBP3BA6NNM3 1639 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 RIMBP3Q9UFD9 1639 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 MYO16Q9Y6X6 1858 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 IQCMA0A1B0GVH7 501 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 SNPHO15079 494 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 SNX2O60749 519 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 DEAF1O75398 565 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 AXLP30530 894 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PMF1Q6P1K2 205 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 ZNF438Q7Z4V0 828 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 RIOX2Q8IUF8 465 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 RHOT1Q8IXI2 618 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 LRTOMTQ8WZ04 291 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 USP7Q93009 1102 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 TWNKQ96RR1 684 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 SP140LQ9H930 580 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CD300AQ9UGN4 299 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 MYH2Q9UKX2 1941 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 MAGEB16A2A368 324 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 SYNCRIPO60506 623 aaKnown RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 PDE8BO95263 885 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 GARTP22102 1010 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 LTKP29376 864 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PSMB10P40306 273 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PRMT2P55345 433 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 BST2Q10589 180 aaKnown RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 COG2Q14746 738 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 MAPK11Q15759 364 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 LEXMQ3ZCV2 418 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CBWD6Q4V339 395 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CBWD3Q5JTY5 395 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CBWD5Q5RIA9 395 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 LDLRAP1Q5SW96 308 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 N4BP2L1Q5TBK1 243 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 TTC39BQ5VTQ0 682 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 RSBN1Q5VWQ0 802 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 FAM71AQ8IYT1 594 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 RCOR2Q8IZ40 523 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CLIP4Q8N3C7 705 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PSD4Q8NDX1 1056 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 MAPK15Q8TD08 544 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CMTM5Q96DZ9 223 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 NARS2Q96I59 477 aaKnown RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 LENG8Q96PV6 779 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 OR52B2Q96RD2 323 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CSF3RQ99062 836 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PCIF1Q9H4Z3 704 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PCDH12Q9NPG4 1184 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 IFT80Q9P2H3 777 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 APEX2Q9UBZ4 518 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 ZNF221Q9UK13 617 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.93□□□□□ -1.946e-8■■■□□ 15.1
CHD9-218ENST00000566029 RICTORQ6R327 1708 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 METTL21EPA6NDL7 271 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CLDN25C9JDP6 229 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 IRAK2O43187 625 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 GRID2O43424 1007 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 MFN2O95140 757 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CYP2C8P10632 490 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 RALAP11233 206 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 RFC4P35249 363 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 TALDO1P37837 337 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 ETFBP38117 255 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 MLLT6P55198 1093 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 NFIXQ14938 502 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 TAZQ16635 292 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 INSCQ1MX18 579 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 TREML2Q5T2D2 321 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 HACD2Q6Y1H2 254 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 ISL2Q96A47 359 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 MAGED4Q96JG8 741 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CNPPD1Q9BV87 410 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 WDR12Q9GZL7 423 aaKnown RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 ADAMTS10Q9H324 1103 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.93□□□□□ -1.943e-7■■■■■ 34.2
CHD9-218ENST00000566029 NPAP1Q9NZP6 1156 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 EIF3KQ9UBQ5 218 aaKnown RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 CCDC182A6NF36 153 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PHGDHO43175 533 aaKnown RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 NMT2O60551 498 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 GAS7O60861 476 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 RASGRP1O95267 797 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms