RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 ECEL1O95672 775 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 NDST3O95803 873 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 FDFT1P37268 417 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 PTGIRP43119 386 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 RPL6Q02878 288 aaKnown RBP16.75■□□□□ 0.27
RNF40-207ENST00000565931 CKAP4Q07065 602 aaKnown RBP16.75■□□□□ 0.27
RNF40-207ENST00000565931 QPCTQ16769 361 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 PLK5Q496M5 336 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 TMEM52BQ4KMG9 183 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 KCTD11Q693B1 232 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 NEK5Q6P3R8 708 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 KDELC2Q7Z4H8 507 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 LPCAT1Q8NF37 534 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 CADM4Q8NFZ8 388 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 SLCO2A1Q92959 643 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 IFT43Q96FT9 208 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 SCRN2Q96FV2 425 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 RUNDC3BQ96NL0 473 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 SMIM14Q96QK8 99 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 ADGRE3Q9BY15 652 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 C6orf106Q9H6K1 298 aaPredicted RBP16.75■□□□□ 0.27
RNF40-207ENST00000565931 PREBQ9HCU5 417 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 RAB6BQ9NRW1 208 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 GGT7Q9UJ14 662 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 ITM2BQ9Y287 266 aa16.75■□□□□ 0.27
RNF40-207ENST00000565931 TBC1D3DA0A087WVF3 549 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 TBC1D3IA0A087WXS9 549 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 TBC1D3EA0A087X179 549 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 TBC1D3KA0A087X1G2 549 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 A0A0J9YYE9 177 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 TBC1D3FA6NER0 549 aaPredicted RBP16.74■□□□□ 0.27
RNF40-207ENST00000565931 ANKRD66B4E2M5 251 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 TBC1D3LB9A6J9 549 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 PSMD3O43242 534 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 TSPAN6O43657 245 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 GAS8O95995 478 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 TRBC1P01850 177 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 ATXN1LP0C7T5 689 aaKnown RBP16.74■□□□□ 0.27
RNF40-207ENST00000565931 TBC1D3HP0C7X1 549 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 CTPS1P17812 591 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 ADRA1AP35348 466 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 EPHB1P54762 984 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 SEMG2Q02383 582 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 ELP6Q0PNE2 266 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 SEMA5AQ13591 1074 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 SIM2Q14190 667 aaPredicted RBP16.74■□□□□ 0.27
RNF40-207ENST00000565931 GALNT3Q14435 633 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 PTPRRQ15256 657 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 TRIP13Q15645 432 aaPredicted RBP16.74■□□□□ 0.27
RNF40-207ENST00000565931 KIAA0895LQ68EN5 471 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 TBC1D3GQ6DHY5 549 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 TBC1D3CQ6IPX1 549 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 ERAP2Q6P179 960 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 ZC3H14Q6PJT7 736 aaKnown RBP16.74■□□□□ 0.27
RNF40-207ENST00000565931 RANBP10Q6VN20 620 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 CEP68Q76N32 757 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 LPCAT2Q7L5N7 544 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 TMEFF1Q8IYR6 380 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 TBC1D3Q8IZP1 549 aaPredicted RBP16.74■□□□□ 0.27
RNF40-207ENST00000565931 NDUFAF2Q8N183 169 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 DEFB119Q8N690 84 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 PDCD7Q8N8D1 485 aaKnown RBP16.74■□□□□ 0.27
RNF40-207ENST00000565931 ZC3H10Q96K80 434 aaKnown RBP16.74■□□□□ 0.27
RNF40-207ENST00000565931 MCCC1Q96RQ3 725 aaPredicted RBP16.74■□□□□ 0.27
RNF40-207ENST00000565931 KRT12Q99456 494 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 FICDQ9BVA6 458 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 PCED1AQ9H1Q7 454 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 DUSP15Q9H1R2 295 aaPredicted RBP16.74■□□□□ 0.27
RNF40-207ENST00000565931 B4GALT6Q9UBX8 382 aa16.74■□□□□ 0.27
RNF40-207ENST00000565931 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.73■□□□□ 0.27
RNF40-207ENST00000565931 GOLGA6CA6NDK9 693 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 GOLGA6BA6NDN3 693 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 PRR23AA6NEV1 266 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 METTL12A8MUP2 240 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 NEMP1O14524 444 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 RNGTTO60942 597 aaKnown RBP16.73■□□□□ 0.27
RNF40-207ENST00000565931 PCDH8O95206 1070 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 AGTP01019 485 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 ALPIP09923 528 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 GOLGA6DP0CG33 693 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 HNF1BP35680 557 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 MMP12P39900 470 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 CHRNA4P43681 627 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 GRIA4P48058 902 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 VPS41P49754 854 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 PPP2CBP62714 309 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 PPP2CAP67775 309 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 FAM193AP78312 1265 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 C2orf54Q08AI8 447 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 RALGDSQ12967 914 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 SPARCL1Q14515 664 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 SPDYCQ5MJ68 293 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 PMS2CLQ68D20 193 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 CCDC70Q6NSX1 233 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 DPPA4Q7L190 304 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 SLC41A1Q8IVJ1 513 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 ATOH1Q92858 354 aaPredicted RBP16.73■□□□□ 0.27
RNF40-207ENST00000565931 RMDN1Q96DB5 314 aa16.73■□□□□ 0.27
RNF40-207ENST00000565931 GOLGA6AQ9NYA3 693 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms