RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 IP6K2Q9UHH9 426 aa19.12■□□□□ 0.65
SPSB3-207ENST00000565550 SALL4Q9UJQ4 1053 aa19.12■□□□□ 0.65
SPSB3-207ENST00000565550 RASA4BC9J798 803 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 INSIG1O15503 277 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 RASA4O43374 803 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 TM7SF2O76062 418 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 IGSF6O95976 241 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 TIMP2P16035 220 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 DESP17661 470 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 IGFALSP35858 605 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 THOP1P52888 689 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 YBEYP58557 167 aaPredicted RBP19.11■□□□□ 0.65
SPSB3-207ENST00000565550 TAS2R40P59535 323 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 C1orf61Q13536 156 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 PTK2BQ14289 1009 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 PIGHQ14442 188 aaPredicted RBP19.11■□□□□ 0.65
SPSB3-207ENST00000565550 ATP13A4Q4VNC1 1196 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 PPP6R3Q5H9R7 873 aaPredicted RBP19.11■□□□□ 0.65
SPSB3-207ENST00000565550 GUSBP11Q6P575 273 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 EFL1Q7Z2Z2 1120 aaKnown RBP19.11■□□□□ 0.65
SPSB3-207ENST00000565550 NIPA2Q8N8Q9 360 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 CXorf40AQ8TE69 158 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 BTN2A2Q8WVV5 523 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 FCRL3Q96P31 734 aaPredicted RBP19.11■□□□□ 0.65
SPSB3-207ENST00000565550 IL12RB2Q99665 862 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 MBNL1Q9NR56 388 aaKnown RBP19.11■□□□□ 0.65
SPSB3-207ENST00000565550 SPASTQ9UBP0 616 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 PNMA8BQ9ULN7 279 aaPredicted RBP19.11■□□□□ 0.65
SPSB3-207ENST00000565550 REXO2Q9Y3B8 237 aaKnown RBP19.11■□□□□ 0.65
SPSB3-207ENST00000565550 MFHAS1Q9Y4C4 1052 aa19.11■□□□□ 0.65
SPSB3-207ENST00000565550 RCCD1A6NED2 376 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 WASH4PA8MWX3 477 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 MYO1FO00160 1098 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 TPP1O14773 563 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 GCATO75600 419 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 LCA5LO95447 670 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 RARAP10276 462 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 TGM2P21980 687 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 PCK1P35558 622 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 SSR1P43307 286 aaKnown RBP19.1■□□□□ 0.65
SPSB3-207ENST00000565550 MAGEA1P43355 309 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 AIF1P55008 147 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 TPI1P60174 286 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 GABREP78334 506 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 SERINC3Q13530 473 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 MESDQ14696 234 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 CYTH1Q15438 398 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 SPACA3Q8IXA5 215 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 ACRBPQ8NEB7 543 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 NAF1Q96HR8 494 aaKnown RBP19.1■□□□□ 0.65
SPSB3-207ENST00000565550 ZNF578Q96N58 590 aaPredicted RBP19.1■□□□□ 0.65
SPSB3-207ENST00000565550 EPAS1Q99814 870 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 WRAP53Q9BUR4 548 aaKnown RBP19.1■□□□□ 0.65
SPSB3-207ENST00000565550 CATSPERBQ9H7T0 1116 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 NCKIPSDQ9NZQ3 722 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 UVRAGQ9P2Y5 699 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 DKK3Q9UBP4 350 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 APOBEC3BQ9UH17 382 aaKnown RBP19.1■□□□□ 0.65
SPSB3-207ENST00000565550 HYOU1Q9Y4L1 999 aa19.1■□□□□ 0.65
SPSB3-207ENST00000565550 EME2A4GXA9 379 aaPredicted RBP19.09■□□□□ 0.65
SPSB3-207ENST00000565550 EEF2KO00418 725 aaKnown RBP19.09■□□□□ 0.65
SPSB3-207ENST00000565550 PROSCO94903 275 aa19.09■□□□□ 0.65
SPSB3-207ENST00000565550 NDUFA10O95299 355 aa19.09■□□□□ 0.65
SPSB3-207ENST00000565550 LSSP48449 732 aa19.09■□□□□ 0.65
SPSB3-207ENST00000565550 YPEL5P62699 121 aa19.09■□□□□ 0.65
SPSB3-207ENST00000565550 TLE3Q04726 772 aa19.09■□□□□ 0.65
SPSB3-207ENST00000565550 NR0B2Q15466 257 aa19.09■□□□□ 0.65
SPSB3-207ENST00000565550 ISXQ2M1V0 245 aa19.09■□□□□ 0.65
SPSB3-207ENST00000565550 PARP15Q460N3 678 aa19.09■□□□□ 0.65
SPSB3-207ENST00000565550 PRRT3Q5FWE3 981 aa19.09■□□□□ 0.65
SPSB3-207ENST00000565550 PHACTR4Q8IZ21 702 aa19.09■□□□□ 0.65
SPSB3-207ENST00000565550 LSMEM2Q8N112 164 aa19.09■□□□□ 0.65
SPSB3-207ENST00000565550 UMODL1-AS1Q8N2C9 162 aa19.09■□□□□ 0.65
SPSB3-207ENST00000565550 TP53I13Q8NBR0 393 aaPredicted RBP19.09■□□□□ 0.65
SPSB3-207ENST00000565550 ZNF248Q8NDW4 579 aa19.09■□□□□ 0.65
SPSB3-207ENST00000565550 EXOC2Q96KP1 924 aa19.09■□□□□ 0.65
SPSB3-207ENST00000565550 LGMNQ99538 433 aa19.09■□□□□ 0.65
SPSB3-207ENST00000565550 C1QTNF7Q9BXJ2 289 aa19.09■□□□□ 0.65
SPSB3-207ENST00000565550 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.09■□□□□ 0.65
SPSB3-207ENST00000565550 LHX3Q9UBR4 397 aa19.09■□□□□ 0.65
SPSB3-207ENST00000565550 PCDHA13Q9Y5I0 950 aa19.09■□□□□ 0.65
SPSB3-207ENST00000565550 EPN1Q9Y6I3 576 aaPredicted RBP19.09■□□□□ 0.65
SPSB3-207ENST00000565550 SMG1Q96Q15 3661 aaKnown RBP19.09■□□□□ 0.65
SPSB3-207ENST00000565550 ANKRD36A6QL64 1941 aa19.08■□□□□ 0.65
SPSB3-207ENST00000565550 A0A0U1RQJ8 604 aa19.08■□□□□ 0.64
SPSB3-207ENST00000565550 PIGNO95427 931 aa19.08■□□□□ 0.64
SPSB3-207ENST00000565550 PRB1P04280 392 aa19.08■□□□□ 0.64
SPSB3-207ENST00000565550 CD48P09326 243 aa19.08■□□□□ 0.64
SPSB3-207ENST00000565550 TMEM52BQ4KMG9 183 aa19.08■□□□□ 0.64
SPSB3-207ENST00000565550 FAXCQ5TGI0 409 aa19.08■□□□□ 0.64
SPSB3-207ENST00000565550 CRTC1Q6UUV9 634 aa19.08■□□□□ 0.64
SPSB3-207ENST00000565550 TP53INP2Q8IXH6 220 aa19.08■□□□□ 0.64
SPSB3-207ENST00000565550 CCDC170Q8IYT3 715 aa19.08■□□□□ 0.64
SPSB3-207ENST00000565550 CELF6Q96J87 481 aaKnown RBP19.08■□□□□ 0.64
SPSB3-207ENST00000565550 HIC2Q96JB3 615 aa19.08■□□□□ 0.64
SPSB3-207ENST00000565550 BAG1Q99933 345 aaPredicted RBP19.08■□□□□ 0.64
SPSB3-207ENST00000565550 LRRC61Q9BV99 259 aa19.08■□□□□ 0.64
SPSB3-207ENST00000565550 BOCQ9BWV1 1114 aa19.08■□□□□ 0.64
SPSB3-207ENST00000565550 CPEB1Q9BZB8 566 aaKnown RBP19.08■□□□□ 0.64
SPSB3-207ENST00000565550 GOLPH3Q9H4A6 298 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms