RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 KRT39Q6A163 491 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 PYHIN1Q6K0P9 492 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 C5orf46Q6UWT4 87 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 TFAP2EQ6VUC0 442 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 ZYG11AQ6WRX3 759 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 NSMFQ6X4W1 530 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 ATG14Q6ZNE5 492 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 KCTD8Q6ZWB6 473 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 USP49Q70CQ1 688 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 DGKHQ86XP1 1220 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 RAB43Q86YS6 212 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 TIGD4Q8IY51 512 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 SMYD4Q8IYR2 804 aaPredicted RBP6.33□□□□□ -1.4
PTPN9-204ENST00000564970 PPM1KQ8N3J5 372 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 ZNF276Q8N554 614 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 PRELID2Q8N945 189 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 BANPQ8N9N5 519 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 ZBTB38Q8NAP3 1195 aaPredicted RBP6.33□□□□□ -1.4
PTPN9-204ENST00000564970 CLRN3Q8NCR9 226 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 MCUQ8NE86 351 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 TMIEQ8NEW7 156 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 RNASE11Q8TAA1 199 aaKnown RBP6.33□□□□□ -1.4
PTPN9-204ENST00000564970 SLC7A14Q8TBB6 771 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 AKAP1Q92667 903 aaKnown RBP eCLIP6.33□□□□□ -1.4
PTPN9-204ENST00000564970 PHKBQ93100 1093 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 ST6GAL2Q96JF0 529 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 GLT1D1Q96MS3 346 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 RDH12Q96NR8 316 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 SLC4A9Q96Q91 983 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 DPYSL5Q9BPU6 564 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 RNF26Q9BY78 433 aaPredicted RBP6.33□□□□□ -1.4
PTPN9-204ENST00000564970 NYXQ9GZU5 481 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 C11orf49Q9H6J7 331 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 TDRD3Q9H7E2 651 aaKnown RBP6.33□□□□□ -1.4
PTPN9-204ENST00000564970 LY9Q9HBG7 655 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 FBXO6Q9NRD1 293 aaPredicted RBP6.33□□□□□ -1.4
PTPN9-204ENST00000564970 AAASQ9NRG9 546 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 ERAP1Q9NZ08 941 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 BFARQ9NZS9 450 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 MARK1Q9P0L2 795 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 GMPR2Q9P2T1 348 aaKnown RBP6.33□□□□□ -1.4
PTPN9-204ENST00000564970 FAM198AQ9UFP1 575 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 MAD2L2Q9UI95 211 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 TRHDEQ9UKU6 1024 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 TRPC5Q9UL62 973 aaPredicted RBP6.33□□□□□ -1.4
PTPN9-204ENST00000564970 ZMIZ1Q9ULJ6 1067 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 PCDHGB4Q9UN71 923 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 KLHL20Q9Y2M5 609 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 TMX2Q9Y320 296 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 SNX13Q9Y5W8 968 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 TAF6LQ9Y6J9 622 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 AP1M2Q9Y6Q5 423 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 DCCP43146 1447 aa6.33□□□□□ -1.4
PTPN9-204ENST00000564970 ZNFX1Q9P2E3 1918 aaKnown RBP6.33□□□□□ -1.4
PTPN9-204ENST00000564970 TNRQ92752 1358 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 LOC102724428A0A0B4J2F2 783 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 MROH6A6NGR9 719 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 A6NL46 340 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 TCP10L2B9ZVM9 353 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 L7N2F9 121 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 TRIM38O00635 465 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ZNF213O14771 459 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 PCDH17O14917 1159 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 PER2O15055 1255 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 HTRA2O43464 458 aaPredicted RBP6.32□□□□□ -1.4
PTPN9-204ENST00000564970 CST8O60676 142 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 FAM13AO94988 1023 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 CCNB2O95067 398 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 CELF2O95319 508 aaKnown RBP6.32□□□□□ -1.4
PTPN9-204ENST00000564970 MED26O95402 600 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 IFNA7P01567 189 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 FABP1P07148 127 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 PROS1P07225 676 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 RBP1P09455 135 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 GJA1P17302 382 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 FGFR2P21802 821 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 TGM2P21980 687 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ME2P23368 584 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ADSSP30520 456 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 CHRNA5P30532 468 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 SLC7A1P30825 629 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 MAGEA4P43358 317 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ARCN1P48444 511 aaKnown RBP6.32□□□□□ -1.4
PTPN9-204ENST00000564970 FNTBP49356 437 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 GZMKP49863 264 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 PGDP52209 483 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ARHGDIAP52565 204 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 SIK1P57059 783 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 JAM2P57087 298 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 EIF3EP60228 445 aaKnown RBP6.32□□□□□ -1.4
PTPN9-204ENST00000564970 SPCS3P61009 180 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ACTR2P61160 394 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 CDKL1Q00532 357 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ZNF91Q05481 1191 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 SLC18A2Q05940 514 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 MGAT3Q09327 533 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 CBLBQ13191 982 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 PPP2R5DQ14738 602 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 ACOX1Q15067 660 aa6.32□□□□□ -1.4
PTPN9-204ENST00000564970 PON2Q15165 354 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms