RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 ARMC12Q5T9G4 340 aa11.32□□□□□ -0.6
SNX29-204ENST00000564791 ZNF449Q6P9G9 518 aa11.32□□□□□ -0.6
SNX29-204ENST00000564791 DPY19L3Q6ZPD9 716 aa11.32□□□□□ -0.6
SNX29-204ENST00000564791 MICALCLQ6ZW33 695 aa11.32□□□□□ -0.6
SNX29-204ENST00000564791 EXOC3L1Q86VI1 746 aa11.32□□□□□ -0.6
SNX29-204ENST00000564791 KCNMB4Q86W47 210 aa11.32□□□□□ -0.6
SNX29-204ENST00000564791 SFTPA1Q8IWL2 248 aa11.32□□□□□ -0.6
SNX29-204ENST00000564791 CHST14Q8NCH0 376 aa11.32□□□□□ -0.6
SNX29-204ENST00000564791 FRS2Q8WU20 508 aa11.32□□□□□ -0.6
SNX29-204ENST00000564791 CDKL2Q92772 493 aa11.32□□□□□ -0.6
SNX29-204ENST00000564791 VOPP1Q96AW1 172 aa11.32□□□□□ -0.6
SNX29-204ENST00000564791 CHFRQ96EP1 664 aa11.32□□□□□ -0.6
SNX29-204ENST00000564791 TRMT61BQ9BVS5 477 aaKnown RBP11.32□□□□□ -0.6
SNX29-204ENST00000564791 ADGRE3Q9BY15 652 aa11.32□□□□□ -0.6
SNX29-204ENST00000564791 ATP13A3Q9H7F0 1226 aa11.32□□□□□ -0.6
SNX29-204ENST00000564791 C20orf96Q9NUD7 363 aaPredicted RBP11.32□□□□□ -0.6
SNX29-204ENST00000564791 ELOVL2Q9NXB9 296 aa11.32□□□□□ -0.6
SNX29-204ENST00000564791 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.32□□□□□ -0.69e-7■■■■□ 22.3
SNX29-204ENST00000564791 ZFATQ9P243 1243 aa11.32□□□□□ -0.6
SNX29-204ENST00000564791 HECAQ9UBI9 543 aaPredicted RBP11.32□□□□□ -0.6
SNX29-204ENST00000564791 KCTD3Q9Y597 815 aa11.32□□□□□ -0.6
SNX29-204ENST00000564791 PCDHB9Q9Y5E1 797 aa11.32□□□□□ -0.6
SNX29-204ENST00000564791 TCF20Q9UGU0 1960 aaKnown RBP11.32□□□□□ -0.6
SNX29-204ENST00000564791 COL4A2P08572 1712 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 ANHXE9PGG2 379 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 GOLGA8TH3BQL2 631 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 ARNTLO00327 626 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 TRAFD1O14545 582 aaPredicted RBP11.31□□□□□ -0.6
SNX29-204ENST00000564791 HTRA2O43464 458 aaPredicted RBP11.31□□□□□ -0.6
SNX29-204ENST00000564791 LDB2O43679 373 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 SOCS5O75159 536 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 PGLSO95336 258 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 PAPSS2O95340 614 aaPredicted RBP11.31□□□□□ -0.6
SNX29-204ENST00000564791 ATP5BP06576 529 aaKnown RBP11.31□□□□□ -0.6
SNX29-204ENST00000564791 KRT15P19012 456 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 KCNA5P22460 613 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 ARNTP27540 789 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 SERPINA4P29622 427 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 SLC8A1P32418 973 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 VASPP50552 380 aaPredicted RBP11.31□□□□□ -0.6
SNX29-204ENST00000564791 CCDC85BQ15834 202 aaPredicted RBP11.31□□□□□ -0.6
SNX29-204ENST00000564791 CNGA3Q16281 694 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 ITPRIPL2Q3MIP1 535 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 HSP90AA5PQ58FG0 334 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 PDPK2PQ6A1A2 396 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 KIAA0930Q6ICG6 404 aaPredicted RBP11.31□□□□□ -0.6
SNX29-204ENST00000564791 NLRP9Q7RTR0 991 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 TRABD2AQ86V40 505 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 SRRM1Q8IYB3 904 aaKnown RBP11.31□□□□□ -0.6
SNX29-204ENST00000564791 TERB1Q8NA31 727 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 OR13J1Q8NGT2 312 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 BRSK1Q8TDC3 778 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 MZB1Q8WU39 189 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 ZDHHC6Q9H6R6 413 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 UBE2ZQ9H832 354 aaPredicted RBP11.31□□□□□ -0.6
SNX29-204ENST00000564791 IARS2Q9NSE4 1012 aaKnown RBP11.31□□□□□ -0.6
SNX29-204ENST00000564791 GGT7Q9UJ14 662 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 ZNF180Q9UJW8 692 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 PSAT1Q9Y617 370 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 ARL5AQ9Y689 179 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 SCN8AQ9UQD0 1980 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 ANKRD66B4E2M5 251 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 CCL22O00626 93 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 BUD23O43709 281 aaKnown RBP11.31□□□□□ -0.6
SNX29-204ENST00000564791 VAPBO95292 243 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 F7P08709 466 aaPredicted RBP11.31□□□□□ -0.6
SNX29-204ENST00000564791 CREB1P16220 341 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 PAMP19021 973 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 NNMTP40261 264 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 GRIA4P48058 902 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 ARCN1P48444 511 aaKnown RBP11.31□□□□□ -0.6
SNX29-204ENST00000564791 ATP1A2P50993 1020 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 EPHB1P54762 984 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 PPP2R2AP63151 447 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 PPARDQ03181 441 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 LAMB3Q13751 1172 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 EIF4HQ15056 248 aaKnown RBP11.31□□□□□ -0.6
SNX29-204ENST00000564791 PTPRRQ15256 657 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 TEDDM1Q5T9Z0 273 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 PACS1Q6VY07 963 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 KDM7AQ6ZMT4 941 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 GLT6D1Q7Z4J2 308 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 ZNF366Q8N895 744 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 MDGA1Q8NFP4 955 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 OR2A12Q8NGT7 310 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 PIH1D2Q8WWB5 315 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 DNAJC1Q96KC8 554 aaKnown RBP11.31□□□□□ -0.6
SNX29-204ENST00000564791 TUBGCP5Q96RT8 1024 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 AGAP2Q99490 1192 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 MTG2Q9H4K7 406 aa11.31□□□□□ -0.6
SNX29-204ENST00000564791 IQANK1A0A1B0GTG1 560 aa11.3□□□□□ -0.6
SNX29-204ENST00000564791 A0A1W2PPM1 405 aa11.3□□□□□ -0.6
SNX29-204ENST00000564791 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.3□□□□□ -0.6
SNX29-204ENST00000564791 C2CD4DB7Z1M9 353 aa11.3□□□□□ -0.6
SNX29-204ENST00000564791 WASH3PC4AMC7 463 aa11.3□□□□□ -0.6
SNX29-204ENST00000564791 TRIM49D1C9J1S8 452 aa11.3□□□□□ -0.6
SNX29-204ENST00000564791 AURKAO14965 403 aa11.3□□□□□ -0.6
SNX29-204ENST00000564791 MBTPS2O43462 519 aa11.3□□□□□ -0.6
SNX29-204ENST00000564791 POP4O95707 220 aaKnown RBP11.3□□□□□ -0.6
SNX29-204ENST00000564791 SLC4A1P02730 911 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms