RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 GJB7Q6PEY0 223 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 RHBDF2Q6PJF5 856 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 POC1AQ8NBT0 407 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 RFWD2Q8NHY2 731 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 GOLGA1Q92805 767 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 WBP2Q969T9 261 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 LRRIQ1Q96JM4 1722 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 OR1F2PQ96R84 312 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 NPLQ9BXD5 320 aaPredicted RBP4.42□□□□□ -1.7
CHD9-212ENST00000564641 SIGLEC1Q9BZZ2 1709 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 CXorf56Q9H5V9 222 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 SAYSD1Q9NPB0 183 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 SPATS2LQ9NUQ6 558 aaKnown RBP4.42□□□□□ -1.7
CHD9-212ENST00000564641 MALT1Q9UDY8 824 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 PZPP20742 1482 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 KANK1Q14678 1352 aa4.41□□□□□ -1.7
CHD9-212ENST00000564641 TNRQ92752 1358 aa4.41□□□□□ -1.7
CHD9-212ENST00000564641 SERPINC1P01008 464 aa4.41□□□□□ -1.7
CHD9-212ENST00000564641 KRT10P13645 584 aa4.41□□□□□ -1.7
CHD9-212ENST00000564641 CTPS1P17812 591 aa4.41□□□□□ -1.7
CHD9-212ENST00000564641 AP5B1Q2VPB7 878 aa4.41□□□□□ -1.7
CHD9-212ENST00000564641 UNQ6126/PRO20091Q6UXV3 157 aa4.41□□□□□ -1.7
CHD9-212ENST00000564641 DCUN1D3Q8IWE4 304 aa4.41□□□□□ -1.7
CHD9-212ENST00000564641 CACNA2D3Q8IZS8 1091 aa4.41□□□□□ -1.7
CHD9-212ENST00000564641 SPICE1Q8N0Z3 855 aa4.41□□□□□ -1.7
CHD9-212ENST00000564641 SH3KBP1Q96B97 665 aa4.41□□□□□ -1.7
CHD9-212ENST00000564641 FEM1CQ96JP0 617 aa4.41□□□□□ -1.7
CHD9-212ENST00000564641 ENTPD7Q9NQZ7 604 aa4.41□□□□□ -1.7
CHD9-212ENST00000564641 ANKRD10Q9NXR5 420 aa4.41□□□□□ -1.7
CHD9-212ENST00000564641 IFT80Q9P2H3 777 aaPredicted RBP4.41□□□□□ -1.7
CHD9-212ENST00000564641 LTBP4Q8N2S1 1624 aa4.41□□□□□ -1.7
CHD9-212ENST00000564641 TCOF1Q13428 1488 aaKnown RBP4.41□□□□□ -1.7
CHD9-212ENST00000564641 UGGT1Q9NYU2 1555 aa4.4□□□□□ -1.7
CHD9-212ENST00000564641 NTN3O00634 580 aaPredicted RBP4.4□□□□□ -1.71
CHD9-212ENST00000564641 TIMM23O14925 209 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 CGAP01215 116 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 KRT72Q14CN4 511 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 MRGPRG-AS1Q2M3A8 158 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 PMS2CLQ68D20 193 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 CCDC129Q6ZRS4 1044 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 MB21D2Q8IYB1 491 aaPredicted RBP4.4□□□□□ -1.71
CHD9-212ENST00000564641 GHDCQ8N2G8 530 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 PGBD5Q8N414 524 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 SETD9Q8NE22 299 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 RASSF8Q8NHQ8 419 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 TMEM170AQ8WVE7 144 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 SCMH1Q96GD3 660 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 CRB3Q9BUF7 120 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 SPRY4Q9C004 299 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 EVA1AQ9H8M9 152 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 UBTD1Q9HAC8 227 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 OR6C3Q9NZP0 311 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 NLKQ9UBE8 527 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 CD207Q9UJ71 328 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 CNPY2Q9Y2B0 182 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 ARHGEF5Q12774 1597 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 TIAM1Q13009 1591 aa4.4□□□□□ -1.71
CHD9-212ENST00000564641 DEPDC5O75140 1603 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 DNMT1P26358 1616 aaKnown RBP4.39□□□□□ -1.71
CHD9-212ENST00000564641 EIF2AK4Q9P2K8 1649 aaKnown RBP4.39□□□□□ -1.71
CHD9-212ENST00000564641 MYOM3Q5VTT5 1437 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 MIA2Q96PC5 1412 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 CAMSAP2Q08AD1 1489 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.39□□□□□ -1.71
CHD9-212ENST00000564641 TULP2O00295 520 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 KRT38O76015 456 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 CSF1P09603 554 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 DGKAP23743 735 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 LIFRP42702 1097 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 SLC18A2Q05940 514 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 DDR1Q08345 913 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 CHAF1AQ13111 956 aaPredicted RBP4.39□□□□□ -1.71
CHD9-212ENST00000564641 DHX34Q14147 1143 aaKnown RBP4.39□□□□□ -1.71
CHD9-212ENST00000564641 DHX8Q14562 1220 aaKnown RBP4.39□□□□□ -1.71
CHD9-212ENST00000564641 ME3Q16798 604 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 ACCSLQ4AC99 568 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 FBXL22Q6P050 247 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 C9orf139Q6ZV77 190 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 TUBA1AQ71U36 451 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 SFTPA2Q8IWL1 248 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 CCDC105Q8IYK2 499 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 TMEM255BQ8WV15 326 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 THAP4Q8WY91 577 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 PKNOX2Q96KN3 472 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 UHRF2Q96PU4 802 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 TUBA1CQ9BQE3 449 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 TWSG1Q9GZX9 223 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 TTC12Q9H892 705 aaPredicted RBP4.39□□□□□ -1.71
CHD9-212ENST00000564641 SYNMO15061 1565 aa4.39□□□□□ -1.71
CHD9-212ENST00000564641 NCOA2Q15596 1464 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 MBD5Q9P267 1494 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 SHANK2Q9UPX8 1470 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 MAP3K1Q13233 1512 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 PRR23AA6NEV1 266 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 PRAC2D3DTV9 90 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 EBAG9O00559 213 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 WNT9BO14905 357 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 AARSP49588 968 aaKnown RBP eCLIP4.38□□□□□ -1.71
CHD9-212ENST00000564641 ARSFP54793 590 aa4.38□□□□□ -1.71
CHD9-212ENST00000564641 CAPSQ13938 189 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms