RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 PTK2Q05397 1052 aa10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 MYBPHQ13203 477 aa10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 SLFN12LQ6IEE8 588 aa10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 BRSK2Q8IWQ3 736 aa10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 TRIM22Q8IYM9 498 aa10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 CARNMT1Q8N4J0 409 aa10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 HJURPQ8NCD3 748 aaPredicted RBP10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 NR4A3Q92570 626 aa10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 ERCC4Q92889 916 aaPredicted RBP10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 CCDC127Q96BQ5 260 aa10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 AIFM3Q96NN9 605 aa10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 SLC24A3Q9HC58 644 aa10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 NEUROD4Q9HD90 331 aa10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 DDX19AQ9NUU7 478 aaKnown RBP10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 LNPEPQ9UIQ6 1025 aa10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 R3HCC1Q9Y3T6 440 aaKnown RBP10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 DGKBQ9Y6T7 804 aa10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 PHF3Q92576 2039 aaKnown RBP10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 TMEM110-MUSTN1A8MSY1 372 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 TISP43B9A030 160 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 RNF103O00237 685 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 ATE1O95260 518 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 CD2BP2O95400 341 aaKnown RBP10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 DEXIO95424 95 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 KIF11P52732 1056 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 VAV2P52735 878 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 EVCP57679 992 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 DEFA6Q01524 100 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 SULT2A1Q06520 285 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 NR5A1Q13285 461 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 ZNF169Q14929 603 aaPredicted RBP10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 SYCP1Q15431 976 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 FAM133BQ5BKY9 247 aaKnown RBP10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 WDR74Q6RFH5 385 aaPredicted RBP10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 NYAP1Q6ZVC0 841 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 CA5BP1Q8WTZ4 195 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 AZIN2Q96A70 460 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 SGSM3Q96HU1 749 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 TMEM60Q9H2L4 133 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 ARMCX1Q9P291 453 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 FARSAQ9Y285 508 aaKnown RBP10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 HBS1LQ9Y450 684 aaKnown RBP10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 CYP46A1Q9Y6A2 500 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 TENM3Q9P273 2699 aa10.72□□□□□ -0.69
HDGFL3-204ENST00000563790 CLIC2O15247 247 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 CUTAO60888 179 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 UNC5CO95185 931 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 TNFP01375 233 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 RARAP10276 462 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 ADRB3P13945 408 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 CHRNA3P32297 505 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 CCT6AP40227 531 aaKnown RBP10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 NEK3P51956 506 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 TRIM29Q14134 588 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 IL11RAQ14626 422 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 DLG2Q15700 870 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 ACCSLQ4AC99 568 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 KCTD16Q68DU8 428 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 ENPP7Q6UWV6 458 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 VPS36Q86VN1 386 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 RASGRP3Q8IV61 690 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 DNAAF3Q8N9W5 541 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 ATL2Q8NHH9 583 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 ROBO4Q8WZ75 1007 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 BRF1Q92994 677 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 NACC2Q96BF6 587 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 PDXPQ96GD0 296 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 PRICKLE1Q96MT3 831 aaPredicted RBP10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 DDX50Q9BQ39 737 aaKnown RBP10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 BDH2Q9BUT1 245 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 ZMYND15Q9H091 742 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 CLEC4MQ9H2X3 399 aaPredicted RBP10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 AKIRIN1Q9H9L7 192 aaPredicted RBP10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 PNPLA8Q9NP80 782 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 LARSQ9P2J5 1176 aaKnown RBP10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 APEX2Q9UBZ4 518 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 KLQ9UEF7 1012 aa10.71□□□□□ -0.69
HDGFL3-204ENST00000563790 E9PMD0 336 aa10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 WNT7AO00755 349 aa10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 PPM1DO15297 605 aa10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 PRNPP04156 253 aa10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 HOXD4P09016 255 aaPredicted RBP10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 TMEM191BP0C7N4 346 aa10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 RPS24P62847 133 aaKnown RBP10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 DMPKQ09013 629 aa10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 NFATC4Q14934 902 aa10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 RNF20Q5VTR2 975 aa10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 RPUSD3Q6P087 351 aaKnown RBP10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 Q6ZUG5 572 aa10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 FAM186BQ8IYM0 893 aa10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 NCOA5Q9HCD5 579 aaKnown RBP10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 IL17CQ9P0M4 197 aa10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 LRFN1Q9P244 771 aa10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 ADGRE2Q9UHX3 823 aa10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 DNM3Q9UQ16 869 aa10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 BOLA1Q9Y3E2 137 aa10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 FHOD1Q9Y613 1164 aa10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 USP3Q9Y6I4 520 aa10.7□□□□□ -0.7
HDGFL3-204ENST00000563790 CR1P17927 2039 aa10.69□□□□□ -0.7
HDGFL3-204ENST00000563790 TYW5A2RUC4 315 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms