RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 GBX2P52951 348 aaPredicted RBP5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 PRKCEQ02156 737 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 MVKQ03426 396 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 RIPK1Q13546 671 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 RUNX2Q13950 521 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 RPS6KA1Q15418 735 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 IMMTQ16891 758 aaKnown RBP5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 ASTE1Q2TB18 679 aaPredicted RBP5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 AFMIDQ63HM1 303 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 KANK2Q63ZY3 851 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 SLC23A3Q6PIS1 610 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 MFSD7Q6UXD7 560 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 KCTD9Q7L273 389 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 ARMCX2Q7L311 632 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 PARS2Q7L3T8 475 aaKnown RBP5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 TAS1R1Q7RTX1 841 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 LDHDQ86WU2 507 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 CDH26Q8IXH8 852 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 BCL6BQ8N143 479 aaPredicted RBP5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 IQUBQ8NA54 791 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 DRAXINQ8NBI3 349 aaPredicted RBP5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 CAMKVQ8NCB2 501 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 TNIP2Q8NFZ5 429 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 SLC2A12Q8TD20 617 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 ABHD5Q8WTS1 349 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 NOC3LQ8WTT2 800 aaKnown RBP5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 ARRDC3Q96B67 414 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 MRPL38Q96DV4 380 aaKnown RBP5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 C5orf34Q96MH7 638 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 HSPA12BQ96MM6 686 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 CFAP57Q96MR6 1250 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 RBM14Q96PK6 669 aaKnown RBP5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 FERMT1Q9BQL6 677 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 BTBD2Q9BX70 525 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 TTYH3Q9C0H2 523 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 COA1Q9GZY4 146 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 RNF32Q9H0A6 362 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 IKZF4Q9H2S9 585 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 SUDS3Q9H7L9 328 aaPredicted RBP5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 FBRSL1Q9HCM7 1045 aaKnown RBP5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 SERINC1Q9NRX5 453 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 HOMER3Q9NSC5 361 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 IARS2Q9NSE4 1012 aaKnown RBP5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 TMLHEQ9NVH6 421 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 ATAD3AQ9NVI7 634 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 P4HTMQ9NXG6 502 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 RAI14Q9P0K7 980 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 IMPACTQ9P2X3 320 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 SPASTQ9UBP0 616 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 EBF1Q9UH73 591 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 N6AMT1Q9Y5N5 214 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 LIPGQ9Y5X9 500 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 TEX264Q9Y6I9 313 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 LAMB4A4D0S4 1761 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 ATRNL1Q5VV63 1379 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 ABCC4O15439 1325 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 FAM205AQ6ZU69 1335 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 TAF1LQ8IZX4 1826 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 LOC105369274A0A096LPK9 316 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 LOC102723532A0A0G2JNH3 316 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 C16orf96A6NNT2 1141 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 AGPSO00116 658 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 RGS10O43665 173 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 VPS4BO75351 444 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 SURF6O75683 361 aaKnown RBP5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 BCAR3O75815 825 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 DDHD2O94830 711 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 PRSS23O95084 383 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 KCNK5O95279 499 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 PRAMEF12O95522 483 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 PAHP00439 452 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 IGKV5-2P06315 115 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 CYC1P08574 325 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 UQCRFS1P1P0C7P4 283 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 RAP2AP10114 183 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 ETS1P14921 441 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 PDGFRAP16234 1089 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 FDXRP22570 491 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 RPS12P25398 132 aaKnown RBP5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 TAGLN2P37802 199 aaKnown RBP5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 ERVFC1P60507 584 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 IL13RA1P78552 427 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 EFNB1P98172 346 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 EGR3Q06889 387 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 SP140Q13342 867 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 MTX1Q13505 466 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 THOC5Q13769 683 aaKnown RBP5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 NKPD1Q17RQ9 610 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 SH2D4BQ5SQS7 431 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 ADGRF1Q5T601 910 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 CYP4A22Q5TCH4 519 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 ZSCAN25Q6NSZ9 544 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 ANGPTL8Q6UXH0 198 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 PPP1R21Q6ZMI0 780 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 PIK3AP1Q6ZUJ8 805 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 ZNF365Q70YC5 407 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 ADCK2Q7Z695 626 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 KLHL7Q8IXQ5 586 aa5.31□□□□□ -1.56
VPS35P1-201ENST00000563400 OR4N4Q8N0Y3 316 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms