RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 CLK4Q9HAZ1 481 aaKnown RBP4.79□□□□□ -1.64
CHD9-206ENST00000562791 FKBP14Q9NWM8 211 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 CCPG1Q9ULG6 757 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 CORO1CQ9ULV4 474 aaPredicted RBP4.79□□□□□ -1.64
CHD9-206ENST00000562791 RABGAP1Q9Y3P9 1069 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 CTTNBP2Q8WZ74 1663 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 ELP1O95163 1332 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 CEP164Q9UPV0 1460 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 TBC1D3DA0A087WVF3 549 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 TBC1D3IA0A087WXS9 549 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 TBC1D3EA0A087X179 549 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 TBC1D3KA0A087X1G2 549 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 TBC1D3BA6NDS4 549 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 TBC1D3FA6NER0 549 aaPredicted RBP4.78□□□□□ -1.64
CHD9-206ENST00000562791 TBC1D3LB9A6J9 549 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 WDR46O15213 610 aaKnown RBP4.78□□□□□ -1.64
CHD9-206ENST00000562791 BIRC5O15392 142 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 RGS14O43566 566 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 TCEA3O75764 348 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 TMCC1O94876 653 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 KLKB1P03952 638 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 LCATP04180 440 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 S100A6P06703 90 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 ACAA1P09110 424 aaPredicted RBP4.78□□□□□ -1.64
CHD9-206ENST00000562791 TBC1D3HP0C7X1 549 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 GYS1P13807 737 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 EZRP15311 586 aaKnown RBP4.78□□□□□ -1.64
CHD9-206ENST00000562791 OAS2P29728 719 aaKnown RBP4.78□□□□□ -1.64
CHD9-206ENST00000562791 ATP5DP30049 168 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 PRKAR2BP31323 418 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 CSTF2P33240 577 aaKnown RBP eCLIP4.78□□□□□ -1.64
CHD9-206ENST00000562791 HSPA4P34932 840 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 MLH1P40692 756 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 TRAPPC10P48553 1259 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 PMS2P54278 862 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 SNX16P57768 344 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 DR1Q01658 176 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 PICALMQ13492 652 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 TBC1D3GQ6DHY5 549 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 TBC1D3CQ6IPX1 549 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 ZNF449Q6P9G9 518 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 SLC16A12Q6ZSM3 486 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 RBM23Q86U06 439 aaKnown RBP4.78□□□□□ -1.64
CHD9-206ENST00000562791 NRSN1Q8IZ57 195 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 TBC1D3Q8IZP1 549 aaPredicted RBP4.78□□□□□ -1.64
CHD9-206ENST00000562791 SLC25A41Q8N5S1 370 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 RNF10Q8N5U6 811 aaKnown RBP4.78□□□□□ -1.64
CHD9-206ENST00000562791 TMEM217Q8N7C4 229 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 KDM1BQ8NB78 822 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 FAM110DQ8TAY7 271 aaPredicted RBP4.78□□□□□ -1.64
CHD9-206ENST00000562791 DEPTORQ8TB45 409 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 SGCDQ92629 289 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 GTF3C6Q969F1 213 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 SDCCAG3Q96C92 435 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 MED30Q96HR3 178 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 MYD88Q99836 296 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 UQCC2Q9BRT2 126 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 ZNF700Q9H0M5 742 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 KRCC1Q9NPI7 259 aaPredicted RBP4.78□□□□□ -1.64
CHD9-206ENST00000562791 PNRC2Q9NPJ4 139 aaKnown RBP4.78□□□□□ -1.64
CHD9-206ENST00000562791 GPR108Q9NPR9 543 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 TCP11L1Q9NUJ3 509 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 IL1RAPL1Q9NZN1 696 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 AIPL1Q9NZN9 384 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 SELENONQ9NZV5 590 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 EPS15L1Q9UBC2 864 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 CDC23Q9UJX2 597 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 MTUS1Q9ULD2 1270 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 MAGED2Q9UNF1 606 aaPredicted RBP4.78□□□□□ -1.64
CHD9-206ENST00000562791 CNTN6Q9UQ52 1028 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 TIMM22Q9Y584 194 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 PTGDR2Q9Y5Y4 395 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 SOGA1O94964 1423 aa4.78□□□□□ -1.64
CHD9-206ENST00000562791 ERICH3Q5RHP9 1530 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 TRBV5-7A0A0A0MS05 114 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 A0A1B0GVT2 93 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 GAGE12JA6NER3 117 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 AGAP5A6NIR3 686 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 CASQ2O14958 399 aaPredicted RBP4.77□□□□□ -1.65
CHD9-206ENST00000562791 LSM1O15116 133 aaKnown RBP4.77□□□□□ -1.65
CHD9-206ENST00000562791 SKAP2O75563 359 aaPredicted RBP4.77□□□□□ -1.65
CHD9-206ENST00000562791 CTCFP49711 727 aaPredicted RBP4.77□□□□□ -1.65
CHD9-206ENST00000562791 RASSF2P50749 326 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 BPIFB3P59826 476 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 AP2B1P63010 937 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 CBX3Q13185 183 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 PLCB4Q15147 1175 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 BCL2A1Q16548 175 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 TMEM95Q3KNT9 176 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 CCDC153Q494R4 210 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 ARMC4Q5T2S8 1044 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 UNC5DQ6UXZ4 953 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 CYP26C1Q6V0L0 522 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 RUFY3Q7L099 469 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 NLRP9Q7RTR0 991 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 CCDC25Q86WR0 208 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 GATAD2AQ86YP4 633 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 TRIML2Q8N7C3 387 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 SPATA3Q8NHX4 192 aa4.77□□□□□ -1.65
CHD9-206ENST00000562791 GDAP1Q8TB36 358 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms