RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 HPDP32754 393 aaPredicted RBP14.37□□□□□ -0.11
COMMD4-205ENST00000562310 GP5P40197 560 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 EPHB1P54762 984 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 CSE1LP55060 971 aaKnown RBP14.37□□□□□ -0.11
COMMD4-205ENST00000562310 ACVR1Q04771 509 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 DNAJC3Q13217 504 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 SMAD4Q13485 552 aaKnown RBP14.37□□□□□ -0.11
COMMD4-205ENST00000562310 HTR4Q13639 388 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 TAF1AQ15573 450 aaPredicted RBP14.37□□□□□ -0.11
COMMD4-205ENST00000562310 UGP2Q16851 508 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 SKIDA1Q1XH10 827 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 MYLK3Q32MK0 819 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 ITPRIPL2Q3MIP1 535 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 TUBB8Q3ZCM7 444 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 ACCSLQ4AC99 568 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 TMEM215Q68D42 235 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 PARM1Q6UWI2 310 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 CES3Q6UWW8 571 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 NUDT18Q6ZVK8 323 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 CNTN4Q8IWV2 1026 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 CALML6Q8TD86 181 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 BLOC1S5Q8TDH9 187 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 STYXQ8WUJ0 223 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 UCMAQ8WVF2 138 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 FGF14Q92915 247 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 MRRFQ96E11 262 aaKnown RBP14.37□□□□□ -0.11
COMMD4-205ENST00000562310 MRGPRX3Q96LB0 322 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 NSMCE3Q96MG7 304 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 ZNF641Q96N77 438 aaPredicted RBP14.37□□□□□ -0.11
COMMD4-205ENST00000562310 C19orf43Q9BQ61 176 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 TNKS2Q9H2K2 1166 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 TRABDQ9H4I3 376 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 SSU72Q9NP77 194 aaKnown RBP14.37□□□□□ -0.11
COMMD4-205ENST00000562310 ELOVL2Q9NXB9 296 aa14.37□□□□□ -0.11
COMMD4-205ENST00000562310 HECAQ9UBI9 543 aaPredicted RBP14.37□□□□□ -0.11
COMMD4-205ENST00000562310 C2orf81A6NN90 581 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 ANKRD66B4E2M5 251 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 ANHXE9PGG2 379 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 TRAFD1O14545 582 aaPredicted RBP14.36□□□□□ -0.11
COMMD4-205ENST00000562310 SLC7A4O43246 635 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 LDB2O43679 373 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 SIN3BO75182 1162 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 ERVK-10P10266 1014 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 CCNHP51946 323 aaPredicted RBP14.36□□□□□ -0.11
COMMD4-205ENST00000562310 KDSRQ06136 332 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 THOC5Q13769 683 aaKnown RBP14.36□□□□□ -0.11
COMMD4-205ENST00000562310 QPCTQ16769 361 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 GRTP1Q5TC63 336 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 ESRP1Q6NXG1 681 aaKnown RBP14.36□□□□□ -0.11
COMMD4-205ENST00000562310 PACS1Q6VY07 963 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 KIAA0408Q6ZU52 694 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 GLT6D1Q7Z4J2 308 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 EXOC3L1Q86VI1 746 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 SUGP1Q8IWZ8 645 aaKnown RBP14.36□□□□□ -0.11
COMMD4-205ENST00000562310 SRRM1Q8IYB3 904 aaKnown RBP14.36□□□□□ -0.11
COMMD4-205ENST00000562310 CYP4X1Q8N118 509 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 NDUFAF2Q8N183 169 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 PAF1Q8N7H5 531 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 TERB1Q8NA31 727 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 PDCD6IPQ8WUM4 868 aaKnown RBP14.36□□□□□ -0.11
COMMD4-205ENST00000562310 ALKBH8Q96BT7 664 aaKnown RBP14.36□□□□□ -0.11
COMMD4-205ENST00000562310 LRIG1Q96JA1 1093 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 SMC6Q96SB8 1091 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 PLA2G2FQ9BZM2 168 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 SMG5Q9UPR3 1016 aaKnown RBP14.36□□□□□ -0.11
COMMD4-205ENST00000562310 PCDHB9Q9Y5E1 797 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 TICRRQ7Z2Z1 1910 aa14.36□□□□□ -0.11
COMMD4-205ENST00000562310 RANBP2P49792 3224 aaKnown RBP14.36□□□□□ -0.11
COMMD4-205ENST00000562310 ZNF106Q9H2Y7 1883 aaKnown RBP14.35□□□□□ -0.11
COMMD4-205ENST00000562310 OTOL1A6NHN0 477 aaPredicted RBP14.35□□□□□ -0.11
COMMD4-205ENST00000562310 TRIM24O15164 1050 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 RPP40O75818 363 aaKnown RBP14.35□□□□□ -0.11
COMMD4-205ENST00000562310 FAM155BO75949 473 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 VAPBO95292 243 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 MT-ND3P03897 115 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 PDHA1P08559 390 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 PSMA3P25788 255 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 NFKBIAP25963 317 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 GJA4P35212 333 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 HADHAP40939 763 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 OPRD1P41143 372 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 ARCN1P48444 511 aaKnown RBP14.35□□□□□ -0.11
COMMD4-205ENST00000562310 ZNF140P52738 457 aaPredicted RBP14.35□□□□□ -0.11
COMMD4-205ENST00000562310 PRAMEP78395 509 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 CBX1P83916 185 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 CNGA3Q16281 694 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 HSP90AA5PQ58FG0 334 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 TEDDM1Q5T9Z0 273 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 Q6ZVU0 165 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 CAMK1DQ8IU85 385 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 UNC5BQ8IZJ1 945 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 PHTF2Q8N3S3 785 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 OR6K2Q8NGY2 324 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 FRS2Q8WU20 508 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 MZB1Q8WU39 189 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 CYB5D2Q8WUJ1 264 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 SCG3Q8WXD2 468 aaKnown RBP14.35□□□□□ -0.11
COMMD4-205ENST00000562310 ECHDC3Q96DC8 303 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 ZNF778Q96MU6 729 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 SELENOSQ9BQE4 189 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms