RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 YPEL5P62699 121 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 SLC20A2Q08357 652 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 NFATC4Q14934 902 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 CCDC14Q49A88 953 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 MANEALQ5VSG8 457 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 NKAIN2Q5VXU1 208 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 ZNF783Q6ZMS7 281 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 SPRED1Q7Z699 444 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 GKN2Q86XP6 184 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 CAMK1DQ8IU85 385 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 FAM71AQ8IYT1 594 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 PTCD2Q8WV60 388 aaKnown RBP11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 SCG3Q8WXD2 468 aaKnown RBP11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 RAB7BQ96AH8 199 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 TBC1D31Q96DN5 1066 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 GDAP1L1Q96MZ0 367 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 C11orf70Q9BRQ4 267 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 FUCA2Q9BTY2 467 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 LGR4Q9BXB1 951 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 EPN3Q9H201 632 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 DPEP2Q9H4A9 486 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 CYP4F12Q9HCS2 524 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 ZNF71Q9NQZ8 489 aaPredicted RBP11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 RRN3Q9NYV6 651 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 LRIT1Q9P2V4 623 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 LHX3Q9UBR4 397 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 PAXBP1Q9Y5B6 917 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 PCDHGA7Q9Y5G6 932 aa11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 PRRC2CQ9Y520 2896 aaKnown RBP11.78□□□□□ -0.52
NSMCE1-202ENST00000561960 TEX33O43247 280 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 CREB3O43889 395 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 BUB1BO60566 1050 aaPredicted RBP11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 IGSF6O95976 241 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 TNFP01375 233 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 PLEKP08567 350 aaPredicted RBP11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 ALPIP09923 528 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 PRKAR1AP10644 381 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 PRKCSHP14314 528 aaPredicted RBP11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 ALDH4A1P30038 563 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 ADRA1BP35368 520 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 RGRP47804 291 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 GABRB2P47870 512 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 PPM1FP49593 454 aaPredicted RBP11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 KLK7P49862 253 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 ARSDP51689 593 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 SNX16P57768 344 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 ARHGEF7Q14155 803 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 PTPRRQ15256 657 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 CYTH1Q15438 398 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 DENND2CQ68D51 928 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 DPY19L2P1Q6NXN4 242 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 BNIPLQ7Z465 357 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 ZNF761Q86XN6 746 aaPredicted RBP11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 FSTL5Q8N475 847 aaPredicted RBP11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 PAF1Q8N7H5 531 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 FAM172AQ8WUF8 416 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 ISG20Q96AZ6 181 aaKnown RBP11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 GRAMD1AQ96CP6 724 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 CELF6Q96J87 481 aaKnown RBP11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 WDR92Q96MX6 357 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 TMEM74Q96NL1 305 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 C1QTNF7Q9BXJ2 289 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 TTYH3Q9C0H2 523 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 SPATS2LQ9NUQ6 558 aaKnown RBP11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 TMEM248Q9NWD8 314 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 TMEM9Q9P0T7 183 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 SEPT10Q9P0V9 454 aa11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 USP9XQ93008 2570 aaPredicted RBP11.77□□□□□ -0.53
NSMCE1-202ENST00000561960 USP9YO00507 2555 aaPredicted RBP11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 A0A0U1RQS6 177 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 J3KR12 359 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 KDELR3O43731 214 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 GFPT2O94808 682 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 LIFP15018 202 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 RHOQP17081 205 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 AK4P27144 223 aaPredicted RBP11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 CCKBRP32239 447 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 PPP1R2P41236 205 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 HDAC4P56524 1084 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 NOMO3P69849 1222 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 MTA1Q13330 715 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 TPD52L1Q16890 204 aaPredicted RBP11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 CERCAMQ5T4B2 595 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 ATP1A1-AS1Q5TC04 95 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 SPECC1LQ69YQ0 1117 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 SCYL2Q6P3W7 929 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 ZDHHC17Q8IUH5 632 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 UNC5BQ8IZJ1 945 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 ZSCAN1Q8NBB4 408 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 GPR156Q8NFN8 814 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 WDR48Q8TAF3 677 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 ASB12Q8WXK4 309 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 ARHGEF26Q96DR7 871 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 CCDC74BQ96LY2 380 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 OSBPL1AQ9BXW6 950 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 GPATCH2LQ9NWQ4 482 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 ANKMY1Q9P2S6 941 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 PPARGC1AQ9UBK2 798 aaKnown RBP11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 RWDD2AQ9UIY3 292 aa11.76□□□□□ -0.53
NSMCE1-202ENST00000561960 PCDHB11Q9Y5F2 797 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms