RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 PPM1NQ8N819 430 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 NIPA2Q8N8Q9 360 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 PSD4Q8NDX1 1056 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 OR2T34Q8NGX1 318 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 OR2T3Q8NH03 318 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 SLC7A14Q8TBB6 771 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 RDH11Q8TC12 318 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 FAM45AQ8TCE6 357 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 MCOLN3Q8TDD5 553 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 LRTOMTQ8WZ04 291 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 ISL2Q96A47 359 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 PDXPQ96GD0 296 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 TNIP3Q96KP6 325 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 SECISBP2Q96T21 854 aaKnown RBP7.31□□□□□ -1.24
CDH1-203ENST00000561751 CSF3RQ99062 836 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 APOL4Q9BPW4 351 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 TMEM246Q9BRR3 403 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 MTG1Q9BT17 334 aaPredicted RBP7.31□□□□□ -1.24
CDH1-203ENST00000561751 ACAT2Q9BWD1 397 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 MTMR12Q9C0I1 747 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 C20orf27Q9GZN8 174 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 DNAI2Q9GZS0 605 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 IFT22Q9H7X7 185 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 NIPAL2Q9H841 368 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 LRRC40Q9H9A6 602 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 ZNF556Q9HAH1 456 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 SCPEP1Q9HB40 452 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 ZBTB26Q9HCK0 441 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 DCP1AQ9NPI6 582 aaPredicted RBP7.31□□□□□ -1.24
CDH1-203ENST00000561751 AASDHPPTQ9NRN7 309 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 AGPAT4Q9NRZ5 378 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 AGPAT3Q9NRZ7 376 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 SLC39A1Q9NY26 324 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 SMPD3Q9NY59 655 aaPredicted RBP7.31□□□□□ -1.24
CDH1-203ENST00000561751 MRPL39Q9NYK5 338 aaKnown RBP7.31□□□□□ -1.24
CDH1-203ENST00000561751 IFT80Q9P2H3 777 aaPredicted RBP7.31□□□□□ -1.24
CDH1-203ENST00000561751 KLQ9UEF7 1012 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 ADAM28Q9UKQ2 775 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 BAG5Q9UL15 447 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 ZNRF3Q9ULT6 936 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 NIP7Q9Y221 180 aaKnown RBP eCLIP7.31□□□□□ -1.24
CDH1-203ENST00000561751 MAST2Q6P0Q8 1798 aa7.31□□□□□ -1.24
CDH1-203ENST00000561751 CNTNAP2Q9UHC6 1331 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 LINC00862A6NCI5 91 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 PRR23AA6NEV1 266 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 LOC110117498-PIK3R3F6TDL0 507 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 H3BMM5 538 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 PLK4O00444 970 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 AIM2O14862 343 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 AURKAO14965 403 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 SLC37A4O43826 429 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 ZBTB14O43829 449 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 ZNF254O75437 659 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 MAFO75444 373 aaPredicted RBP7.3□□□□□ -1.24
CDH1-203ENST00000561751 TOM1L1O75674 476 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 SORBS2O94875 1100 aaKnown RBP7.3□□□□□ -1.24
CDH1-203ENST00000561751 IL18RAPO95256 599 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 GCNT3O95395 438 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 TOP3BO95985 862 aaKnown RBP7.3□□□□□ -1.24
CDH1-203ENST00000561751 ITGB2P05107 769 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 CYP2D6P10635 497 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 ACADMP11310 421 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 IL1R1P14778 569 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 DPEP1P16444 411 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 ITGA2P17301 1181 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 ATF6P18850 670 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 RPL22P35268 128 aaKnown RBP7.3□□□□□ -1.24
CDH1-203ENST00000561751 SERPINB5P36952 375 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 GP5P40197 560 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 HADHAP40939 763 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 ELK3P41970 407 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 MAPKAPK2P49137 400 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 VAMP7P51809 220 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 PLA2G16P53816 162 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 MLLT10P55197 1068 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 PSME3P61289 254 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 MRPS15P82914 257 aaKnown RBP7.3□□□□□ -1.24
CDH1-203ENST00000561751 PRKCEQ02156 737 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 MVKQ03426 396 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 IL18R1Q13478 541 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 BFSP2Q13515 415 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 IRF5Q13568 498 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 PDK2Q15119 407 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 TSC22D1Q15714 1073 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 CTF1Q16619 201 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 SLC35G1Q2M3R5 365 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 C12orf60Q5U649 245 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 PIK3R6Q5UE93 754 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 TTC23Q5W5X9 447 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 FAM205BPQ63HN1 556 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 HMBOX1Q6NT76 420 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 TAF2Q6P1X5 1199 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 C8orf82Q6P1X6 216 aaPredicted RBP7.3□□□□□ -1.24
CDH1-203ENST00000561751 SPOCD1Q6ZMY3 1216 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 SLC16A12Q6ZSM3 486 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 BBS12Q6ZW61 710 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 ZNF720Q7Z2F6 126 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 DSG4Q86SJ6 1040 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 SNX32Q86XE0 403 aa7.3□□□□□ -1.24
CDH1-203ENST00000561751 ERO1BQ86YB8 467 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms