RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 CACTIN-AS1Q8N1I8 211 aa16.32■□□□□ 0.2
SPG21-211ENST00000560564 PDCD7Q8N8D1 485 aaKnown RBP16.32■□□□□ 0.2
SPG21-211ENST00000560564 APOLD1Q96LR9 279 aa16.32■□□□□ 0.2
SPG21-211ENST00000560564 ZNF599Q96NL3 588 aa16.32■□□□□ 0.2
SPG21-211ENST00000560564 CINPQ9BW66 212 aaPredicted RBP16.32■□□□□ 0.2
SPG21-211ENST00000560564 CSNK1G3Q9Y6M4 447 aa16.32■□□□□ 0.2
SPG21-211ENST00000560564 KIF26BQ2KJY2 2108 aa16.31■□□□□ 0.2
SPG21-211ENST00000560564 NEMP2A6NFY4 417 aa16.31■□□□□ 0.2
SPG21-211ENST00000560564 TOR1BO14657 336 aa16.31■□□□□ 0.2
SPG21-211ENST00000560564 PRKCGP05129 697 aa16.31■□□□□ 0.2
SPG21-211ENST00000560564 JUNDP17535 347 aa16.31■□□□□ 0.2
SPG21-211ENST00000560564 EIF4A3P38919 411 aaKnown RBP16.31■□□□□ 0.2
SPG21-211ENST00000560564 LIG3P49916 1009 aa16.31■□□□□ 0.2
SPG21-211ENST00000560564 AP1S1P61966 158 aa16.31■□□□□ 0.2
SPG21-211ENST00000560564 SEMG2Q02383 582 aa16.31■□□□□ 0.2
SPG21-211ENST00000560564 LBRQ14739 615 aaKnown RBP16.31■□□□□ 0.2
SPG21-211ENST00000560564 SKOR2Q2VWA4 1001 aaPredicted RBP16.31■□□□□ 0.2
SPG21-211ENST00000560564 TMCO3Q6UWJ1 677 aa16.31■□□□□ 0.2
SPG21-211ENST00000560564 MACC1Q6ZN28 852 aa16.31■□□□□ 0.2
SPG21-211ENST00000560564 PGBD5Q8N414 524 aa16.31■□□□□ 0.2
SPG21-211ENST00000560564 ZNF564Q8TBZ8 553 aaPredicted RBP16.31■□□□□ 0.2
SPG21-211ENST00000560564 DNAJC7Q99615 494 aa16.31■□□□□ 0.2
SPG21-211ENST00000560564 C1QTNF7Q9BXJ2 289 aa16.31■□□□□ 0.2
SPG21-211ENST00000560564 PACSIN1Q9BY11 444 aa16.31■□□□□ 0.2
SPG21-211ENST00000560564 RCOR3Q9P2K3 495 aaPredicted RBP16.31■□□□□ 0.2
SPG21-211ENST00000560564 SEPT3Q9UH03 358 aa16.31■□□□□ 0.2
SPG21-211ENST00000560564 CFAP69A5D8W1 941 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 H3BM21 787 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 MYO1FO00160 1098 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 AQP9O43315 295 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 CD48P09326 243 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 ALPPL2P10696 532 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 MYF5P13349 255 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 JUPP14923 745 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 GM2AP17900 193 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 XPAP23025 273 aaPredicted RBP16.3■□□□□ 0.2
SPG21-211ENST00000560564 HNF1BP35680 557 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 THOP1P52888 689 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 DAB2P98082 770 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 BCL2L1Q07817 233 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 CYP4F3Q08477 520 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 TARDBPQ13148 414 aaKnown RBP eCLIP16.3■□□□□ 0.24e-8■■■■□ 21.4
SPG21-211ENST00000560564 LRRC14Q15048 493 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 NFKBIBQ15653 356 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 SLC18A3Q16572 532 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 ERAP2Q6P179 960 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 DCBLD1Q8N8Z6 715 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 TBATAQ96M53 351 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 MGME1Q9BQP7 344 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 LRRC61Q9BV99 259 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 DUSP23Q9BVJ7 150 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 RALYQ9UKM9 306 aaKnown RBP16.3■□□□□ 0.2
SPG21-211ENST00000560564 GPSM3Q9Y4H4 160 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.3■□□□□ 0.2
SPG21-211ENST00000560564 ATRXP46100 2492 aa16.3■□□□□ 0.2
SPG21-211ENST00000560564 TTC24A2A3L6 582 aaPredicted RBP16.29■□□□□ 0.2
SPG21-211ENST00000560564 HTRA2O43464 458 aaPredicted RBP16.29■□□□□ 0.2
SPG21-211ENST00000560564 GCATO75600 419 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 PROSCO94903 275 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 TPM3P06753 285 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 PEX5P50542 639 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 SCNN1BP51168 640 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 RENBPP51606 427 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 CDH6P55285 790 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 E2F1Q01094 437 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 MMRN1Q13201 1228 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 DPYSL3Q14195 570 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 PTK2BQ14289 1009 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 ATP13A4Q4VNC1 1196 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 CFAP58Q5T655 872 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 CDCP2Q5VXM1 449 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 SPECC1LQ69YQ0 1117 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 ZCCHC8Q6NZY4 707 aaKnown RBP16.29■□□□□ 0.2
SPG21-211ENST00000560564 LIPIQ6XZB0 460 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 NYAP1Q6ZVC0 841 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 DPPA4Q7L190 304 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 PHACTR4Q8IZ21 702 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 USP29Q9HBJ7 922 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 APOBEC3BQ9UH17 382 aaKnown RBP16.29■□□□□ 0.2
SPG21-211ENST00000560564 RAXQ9Y2V3 346 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 UNC13CQ8NB66 2214 aa16.29■□□□□ 0.2
SPG21-211ENST00000560564 SSU72P8A0A1W2PR75 194 aa16.28■□□□□ 0.2
SPG21-211ENST00000560564 TPP1O14773 563 aa16.28■□□□□ 0.2
SPG21-211ENST00000560564 SOCS5O75159 536 aa16.28■□□□□ 0.2
SPG21-211ENST00000560564 GP1BAP07359 652 aa16.28■□□□□ 0.2
SPG21-211ENST00000560564 SERPINB6P35237 376 aa16.28■□□□□ 0.2
SPG21-211ENST00000560564 HSPA9P38646 679 aaKnown RBP16.28■□□□□ 0.2
SPG21-211ENST00000560564 TAS2R40P59535 323 aa16.28■□□□□ 0.2
SPG21-211ENST00000560564 ZNF235Q14590 738 aa16.28■□□□□ 0.2
SPG21-211ENST00000560564 RTP5Q14D33 572 aa16.28■□□□□ 0.2
SPG21-211ENST00000560564 HS1BP3Q53T59 392 aa16.28■□□□□ 0.2
SPG21-211ENST00000560564 PRRT3Q5FWE3 981 aa16.28■□□□□ 0.2
SPG21-211ENST00000560564 KCTD16Q68DU8 428 aa16.28■□□□□ 0.2
SPG21-211ENST00000560564 VSTM4Q8IW00 320 aa16.28■□□□□ 0.2
SPG21-211ENST00000560564 ATPAF2Q8N5M1 289 aa16.28■□□□□ 0.2
SPG21-211ENST00000560564 OR8K1Q8NGG5 319 aa16.28■□□□□ 0.2
SPG21-211ENST00000560564 PCDH19Q8TAB3 1148 aa16.28■□□□□ 0.2
SPG21-211ENST00000560564 LMX1AQ8TE12 382 aa16.28■□□□□ 0.2
SPG21-211ENST00000560564 BTN2A2Q8WVV5 523 aa16.28■□□□□ 0.2
SPG21-211ENST00000560564 NUDCD1Q96RS6 583 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms