RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 ZSCAN22P10073 491 aaPredicted RBP9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 KRT5P13647 590 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 CD1CP29017 333 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 ALDH4A1P30038 563 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 ACVRL1P37023 503 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 SYKP43405 635 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 NDUFA8P51970 172 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 LIMK2P53671 638 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 SNRPD1P62314 119 aaKnown RBP9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 BRMS1LQ5PSV4 323 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 ATXN7L2Q5T6C5 722 aaPredicted RBP9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 SPECC1LQ69YQ0 1117 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 ATL3Q6DD88 541 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 OLFML1Q6UWY5 402 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 GDPD4Q6W3E5 623 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 KRBA2Q6ZNG9 492 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 C17orf82Q86X59 251 aaPredicted RBP9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 OR2AP1Q8NGE2 309 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 APOBEC4Q8WW27 367 aaKnown RBP9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 OR1E3Q8WZA6 343 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 ARHGEF2Q92974 986 aaKnown RBP9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 NT5C3BQ969T7 300 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 DDA1Q9BW61 102 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 OSBPL1AQ9BXW6 950 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 TMEM168Q9H0V1 697 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 DPEP2Q9H4A9 486 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 GPN2Q9H9Y4 310 aaPredicted RBP9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 SPATS2LQ9NUQ6 558 aaKnown RBP9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 NDFIP2Q9NV92 336 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 SLC39A1Q9NY26 324 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 CFAP45Q9UL16 551 aa9.02□□□□□ -0.97
RABGGTA-217ENST00000560521 CXorf51AA0A1B0GTR3 108 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 A1L4Q6 167 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 THAP12O43422 761 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 VPS4BO75351 444 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 ERBB2P04626 1255 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 MPSTP25325 297 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 GNA15P30679 374 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 MAZP56270 477 aaKnown RBP9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 SLC6A3Q01959 620 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 NR1D2Q14995 579 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 AGERQ15109 404 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 ATP1A1-AS1Q5TC04 95 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 NKAIN2Q5VXU1 208 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 ANKS6Q68DC2 871 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 LEKR1Q6ZMV7 388 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 C11orf57Q6ZUT1 292 aaPredicted RBP9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 SLC26A9Q7LBE3 791 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 TIPARPQ7Z3E1 657 aaKnown RBP9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 ZNF438Q7Z4V0 828 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 DRC7Q8IY82 874 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 UNC5BQ8IZJ1 945 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 TEX19Q8NA77 164 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 NETO2Q8NC67 525 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 PLA2G15Q8NCC3 412 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 ZNF397Q8NF99 534 aaPredicted RBP9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 PGAP3Q96FM1 320 aaPredicted RBP9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 TSG101Q99816 390 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 GTPBP4Q9BZE4 634 aaKnown RBP9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 ASPSCR1Q9BZE9 553 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 ZYG11BQ9C0D3 744 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 FGF22Q9HCT0 170 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 PRDM8Q9NQV8 689 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 VPS4AQ9UN37 437 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 MED13LQ71F56 2210 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 ABCA12Q86UK0 2595 aa9.01□□□□□ -0.97
RABGGTA-217ENST00000560521 DIDO1Q9BTC0 2240 aaKnown RBP9□□□□□ -0.97
RABGGTA-217ENST00000560521 EFCAB7A8K855 629 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 P4HA2O15460 535 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 PCCBP05166 539 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 FGF1P05230 155 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 MAP4P27816 1152 aaKnown RBP9□□□□□ -0.97
RABGGTA-217ENST00000560521 DCTP40126 519 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 SULT1E1P49888 294 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 RNASE9P60153 205 aaKnown RBP9□□□□□ -0.97
RABGGTA-217ENST00000560521 MTM1Q13496 603 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 TRA2AQ13595 282 aaKnown RBP eCLIP9□□□□□ -0.97
RABGGTA-217ENST00000560521 SEPT6Q14141 434 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 POLD3Q15054 466 aaPredicted RBP9□□□□□ -0.97
RABGGTA-217ENST00000560521 CLPPQ16740 277 aaPredicted RBP9□□□□□ -0.97
RABGGTA-217ENST00000560521 COBLL1Q53SF7 1204 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 DCAF12Q5T6F0 453 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 TCTN3Q6NUS6 607 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 C16orf46Q6P387 395 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 NRROSQ86YC3 692 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 TICAM1Q8IUC6 712 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 PASD1Q8IV76 773 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 NLGN4XQ8N0W4 816 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 BMPERQ8N8U9 685 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 GALNT11Q8NCW6 608 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 AGBL5Q8NDL9 886 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 NLGN4YQ8NFZ3 816 aaPredicted RBP9□□□□□ -0.97
RABGGTA-217ENST00000560521 OR4D9Q8NGE8 314 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 OR56A4Q8NGH8 313 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 ATL2Q8NHH9 583 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 RTP4Q96DX8 246 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 HAPLN3Q96S86 360 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 TBCBQ99426 244 aa9□□□□□ -0.97
RABGGTA-217ENST00000560521 UBE2TQ9NPD8 197 aaPredicted RBP9□□□□□ -0.97
RABGGTA-217ENST00000560521 RRN3Q9NYV6 651 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms