RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 TMEM51Q9NW97 253 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 OR12D3Q9UGF7 316 aa10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 AJAP1Q9UKB5 411 aaPredicted RBP10.6□□□□□ -0.71
CDC42BPB-207ENST00000560492 AHCTF1Q8WYP5 2266 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 A0A1W2PQM1 296 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 AREL1O15033 823 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 NVLO15381 856 aaKnown RBP10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 SUV39H1O43463 412 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 NOBOXO60393 691 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 BMP6P22004 513 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 PON1P27169 355 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 CCKBRP32239 447 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 CLCN1P35523 988 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 ETV5P41161 510 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 ATP1A2P50993 1020 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 ELP6Q0PNE2 266 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 MORC3Q14149 939 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 INPP5AQ14642 412 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 AMZ1Q400G9 498 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 ERAP2Q6P179 960 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 FOXR2Q6PJQ5 311 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 PHLDB2Q86SQ0 1253 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 EMC1Q8N766 993 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 TBC1D31Q96DN5 1066 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 PDXPQ96GD0 296 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 EXOC2Q96KP1 924 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 APOOQ9BUR5 198 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 MAGEH1Q9H213 219 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 DPEP2Q9H4A9 486 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 NDFIP2Q9NV92 336 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 FOXJ2Q9P0K8 574 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 PPARGC1AQ9UBK2 798 aaKnown RBP10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 RNF215Q9Y6U7 377 aa10.59□□□□□ -0.71
CDC42BPB-207ENST00000560492 PTPN13Q12923 2485 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 ZSCAN5CA6NGD5 496 aaPredicted RBP10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 CACNB4O00305 520 aaPredicted RBP10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 PIGNO95427 931 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 CD160O95971 181 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 PRKCSHP14314 528 aaPredicted RBP10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 GLB1P16278 677 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 RHOQP17081 205 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 SDC4P31431 198 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 SCNN1AP37088 669 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 PEX5P50542 639 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 C15orf59Q2T9L4 293 aaPredicted RBP10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 WSCD2Q2TBF2 565 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 NAA35Q5VZE5 725 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 IL22RA1Q8N6P7 574 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 CPA5Q8WXQ8 436 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 NT5C3BQ969T7 300 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 TMEM159Q96B96 161 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 TTYH3Q9C0H2 523 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 SLC25A18Q9H1K4 315 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 TMEM248Q9NWD8 314 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 LRIT1Q9P2V4 623 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 ZNF212Q9UDV6 495 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 DAAM1Q9Y4D1 1078 aa10.58□□□□□ -0.72
CDC42BPB-207ENST00000560492 ARHGEF17Q96PE2 2063 aaPredicted RBP10.57□□□□□ -0.72
CDC42BPB-207ENST00000560492 KDELR3O43731 214 aa10.57□□□□□ -0.72
CDC42BPB-207ENST00000560492 CYP11B1P15538 503 aa10.57□□□□□ -0.72
CDC42BPB-207ENST00000560492 TIMP2P16035 220 aa10.57□□□□□ -0.72
CDC42BPB-207ENST00000560492 ITGB6P18564 788 aa10.57□□□□□ -0.72
CDC42BPB-207ENST00000560492 ALDH4A1P30038 563 aa10.57□□□□□ -0.72
CDC42BPB-207ENST00000560492 GABRB2P47870 512 aa10.57□□□□□ -0.72
CDC42BPB-207ENST00000560492 C14orf28Q4W4Y0 310 aa10.57□□□□□ -0.72
CDC42BPB-207ENST00000560492 TRNP1Q6NT89 227 aa10.57□□□□□ -0.72
CDC42BPB-207ENST00000560492 NYAP1Q6ZVC0 841 aa10.57□□□□□ -0.72
CDC42BPB-207ENST00000560492 SPRED1Q7Z699 444 aa10.57□□□□□ -0.72
CDC42BPB-207ENST00000560492 PIM3Q86V86 326 aa10.57□□□□□ -0.72
CDC42BPB-207ENST00000560492 HMCESQ96FZ2 354 aa10.57□□□□□ -0.72
CDC42BPB-207ENST00000560492 RDH14Q9HBH5 336 aa10.57□□□□□ -0.72
CDC42BPB-207ENST00000560492 CYP4F12Q9HCS2 524 aa10.57□□□□□ -0.72
CDC42BPB-207ENST00000560492 PCDH12Q9NPG4 1184 aa10.57□□□□□ -0.72
CDC42BPB-207ENST00000560492 MRPL40Q9NQ50 206 aaKnown RBP10.57□□□□□ -0.72
CDC42BPB-207ENST00000560492 ACSL6Q9UKU0 697 aa10.57□□□□□ -0.72
CDC42BPB-207ENST00000560492 SDK2Q58EX2 2172 aa10.57□□□□□ -0.72
CDC42BPB-207ENST00000560492 UBR5O95071 2799 aaPredicted RBP10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 A0A1W2PQC6 194 aa10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 GTPBP10A4D1E9 387 aaKnown RBP10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 RHPN2P1A8MT19 583 aa10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 C9orf172C9J069 976 aa10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 FAM72CH0Y354 149 aa10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 STMND1H3BQB6 276 aa10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 INSIG1O15503 277 aa10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 TEX33O43247 280 aa10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 ZW10O43264 779 aa10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 CREB3O43889 395 aa10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 LRIG2O94898 1065 aa10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 PRKCGP05129 697 aa10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 MMEP08473 750 aa10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 PLEKP08567 350 aaPredicted RBP10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 WT1P19544 449 aaPredicted RBP10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 KELP23276 732 aa10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 CD82P27701 267 aa10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 EPHB2P29323 1055 aa10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 ADRA1BP35368 520 aa10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 LIG3P49916 1009 aa10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 SRSF1Q07955 248 aaKnown RBP eCLIP10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 MTM1Q13496 603 aa10.56□□□□□ -0.72
CDC42BPB-207ENST00000560492 CLCA4Q14CN2 919 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms