RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 MTSS1LQ765P7 747 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 KDELC2Q7Z4H8 507 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 SETD3Q86TU7 594 aaPredicted RBP5.3□□□□□ -1.56
SPG11-220ENST00000559933 ADIPOR2Q86V24 386 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 CACUL1Q86Y37 369 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 CCDC13Q8IYE1 715 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 ZNF567Q8N184 647 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 CPA6Q8N4T0 437 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 MMGT1Q8N4V1 131 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 CNTD1Q8N815 330 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 SPATA22Q8NHS9 363 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 FIBINQ8TAL6 211 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 TFB1MQ8WVM0 346 aaKnown RBP5.3□□□□□ -1.56
SPG11-220ENST00000559933 HTR3CQ8WXA8 447 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 CASKIN2Q8WXE0 1202 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 HDAC11Q96DB2 347 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 AGAP3Q96P47 875 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 SMIM14Q96QK8 99 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 ACOX2Q99424 681 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 NAP1L3Q99457 506 aaPredicted RBP5.3□□□□□ -1.56
SPG11-220ENST00000559933 APOL2Q9BQE5 337 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 FEM1AQ9BSK4 669 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 ACE2Q9BYF1 805 aaPredicted RBP5.3□□□□□ -1.56
SPG11-220ENST00000559933 TM6SF2Q9BZW4 377 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 CIPCQ9C0C6 399 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 NRSN2Q9GZP1 204 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 BRD9Q9H8M2 597 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 NT5MQ9NPB1 228 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 THG1LQ9NWX6 298 aaKnown RBP5.3□□□□□ -1.56
SPG11-220ENST00000559933 GRHL1Q9NZI5 618 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 KLHL8Q9P2G9 620 aaPredicted RBP5.3□□□□□ -1.56
SPG11-220ENST00000559933 THEGQ9P2T0 379 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 LHX3Q9UBR4 397 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 ASIC3Q9UHC3 531 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 DCTN4Q9UJW0 460 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 CA14Q9ULX7 337 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 SNX24Q9Y343 169 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 MUC3AQ02505 3323 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 MYLKQ15746 1914 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.29□□□□□ -1.56
SPG11-220ENST00000559933 A0A0U1RQS6 177 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 ILVBLA1L0T0 632 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 EFCAB8A8MWE9 144 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 TTC34A8MYJ7 566 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 HACD1B0YJ81 288 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 WASH3PC4AMC7 463 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 SPECC1L-ADORA2AF8WAN1 911 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 CCDC188H7C350 402 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 SLC9A3R1O14745 358 aaPredicted RBP5.29□□□□□ -1.56
SPG11-220ENST00000559933 MATN3O15232 486 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 TP73O15350 636 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 KDELR3O43731 214 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 USP12O75317 370 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 KAT7O95251 611 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 PIGNO95427 931 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 MT-CYBP00156 380 aaPredicted RBP5.29□□□□□ -1.56
SPG11-220ENST00000559933 EGFP01133 1207 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 PRKCGP05129 697 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 F13BP05160 661 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 ITGAVP06756 1048 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 MMP2P08253 660 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 CCNB1P14635 433 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 PRKCHP24723 683 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 ECHS1P30084 290 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 GRIA1P42261 906 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 MMP13P45452 471 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 NR2C2P49116 596 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 CARSP49589 748 aaKnown RBP5.29□□□□□ -1.56
SPG11-220ENST00000559933 ZNF135P52742 658 aaPredicted RBP5.29□□□□□ -1.56
SPG11-220ENST00000559933 METAP1P53582 386 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 VSNL1P62760 191 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 BASP1P80723 227 aaKnown RBP5.29□□□□□ -1.56
SPG11-220ENST00000559933 GPS1Q13098 491 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 PTK6Q13882 451 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 TUBB2AQ13885 445 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 SMAD1Q15797 465 aaKnown RBP5.29□□□□□ -1.56
SPG11-220ENST00000559933 P3H1Q32P28 736 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 ITPRIPL2Q3MIP1 535 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 POM121L1PQ3SYA9 428 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 PARP15Q460N3 678 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 LRRC73Q5JTD7 316 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 ANKRD20A2Q5SQ80 823 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 MPP7Q5T2T1 576 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 TMCO4Q5TGY1 634 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 ANKRD20A1Q5TYW2 823 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 ANKRD20A3Q5VUR7 823 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 IZUMO3Q5VZ72 239 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 EGFLAMQ63HQ2 1017 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 GRAMD4Q6IC98 578 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 C22orf39Q6P5X5 142 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 PKN3Q6P5Z2 889 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 DRICH1Q6PGQ1 229 aaPredicted RBP5.29□□□□□ -1.56
SPG11-220ENST00000559933 ZDHHC24Q6UX98 284 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 TPRG1Q6ZUI0 275 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 DTX1Q86Y01 620 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 ADHFE1Q8IWW8 467 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 AHI1Q8N157 1196 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 CCDC89Q8N998 374 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 TERB1Q8NA31 727 aa5.29□□□□□ -1.56
SPG11-220ENST00000559933 DCAF4L2Q8NA75 395 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms