RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 FHOD1Q9Y613 1164 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 HS3ST3A1Q9Y663 406 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 BSNQ9UPA5 3926 aa5.9□□□□□ -1.47
USP3-215ENST00000559771 IGLON5A6NGN9 336 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 A6NNZ2 444 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 AREL1O15033 823 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 RRP8O43159 456 aaKnown RBP5.89□□□□□ -1.47
USP3-215ENST00000559771 AP1G1O43747 822 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 ZNF500O60304 480 aaPredicted RBP5.89□□□□□ -1.47
USP3-215ENST00000559771 SRGAP2O75044 1071 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 CSO75390 466 aaKnown RBP5.89□□□□□ -1.47
USP3-215ENST00000559771 GCATO75600 419 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 PCDH8O95206 1070 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 PRNPP04156 253 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 GP1BAP07359 652 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 PLA2G2AP14555 144 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 NME1P15531 152 aaKnown RBP5.89□□□□□ -1.47
USP3-215ENST00000559771 CHRNB2P17787 502 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 ITIH2P19823 946 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 OR1E1P30953 314 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 AKT2P31751 481 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 KRT9P35527 623 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 ACTN2P35609 894 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 LSSP48449 732 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 CCNHP51946 323 aaPredicted RBP5.89□□□□□ -1.47
USP3-215ENST00000559771 NEK3P51956 506 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 PFN3P60673 137 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 NOMO3P69849 1222 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 DAB2P98082 770 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 GNA12Q03113 381 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 VAC14Q08AM6 782 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 C19orf57Q0VDD7 668 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 PTP4A2Q12974 167 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 MTA1Q13330 715 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 DRAP1Q14919 205 aaPredicted RBP5.89□□□□□ -1.47
USP3-215ENST00000559771 MAN2A1Q16706 1144 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 CARD16Q5EG05 197 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 PERM1Q5SV97 790 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 FAM102AQ5T9C2 384 aaPredicted RBP5.89□□□□□ -1.47
USP3-215ENST00000559771 KLHDC7AQ5VTJ3 777 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 TAF3Q5VWG9 929 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 GUSBP11Q6P575 273 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 ZNF783Q6ZMS7 281 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 RBM43Q6ZSC3 357 aaKnown RBP5.89□□□□□ -1.47
USP3-215ENST00000559771 GPR155Q7Z3F1 870 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 FAM131BQ86XD5 332 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 ZDHHC17Q8IUH5 632 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 RBFAQ8N0V3 343 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 PCDH20Q8N6Y1 951 aaKnown RBP5.89□□□□□ -1.47
USP3-215ENST00000559771 EMC1Q8N766 993 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 TMEM35BQ8NCS4 154 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 LSM14AQ8ND56 463 aaKnown RBP5.89□□□□□ -1.47
USP3-215ENST00000559771 OR6K2Q8NGY2 324 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 SLC20A1Q8WUM9 679 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 SNRNP27Q8WVK2 155 aaKnown RBP5.89□□□□□ -1.47
USP3-215ENST00000559771 CPA5Q8WXQ8 436 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 GLMNQ92990 594 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 FUBP1Q96AE4 644 aaKnown RBP5.89□□□□□ -1.47
USP3-215ENST00000559771 CENPTQ96BT3 561 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 C18orf8Q96DM3 657 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 CALR3Q96L12 384 aaKnown RBP5.89□□□□□ -1.47
USP3-215ENST00000559771 LENG8Q96PV6 779 aaPredicted RBP5.89□□□□□ -1.47
USP3-215ENST00000559771 HAPLN3Q96S86 360 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 HEPHQ9BQS7 1158 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 SEMA4CQ9C0C4 833 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 ZYG11BQ9C0D3 744 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 CEP44Q9C0F1 390 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 KLC2Q9H0B6 622 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 OSBPL2Q9H1P3 480 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 NDST4Q9H3R1 872 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 NOL6Q9H6R4 1146 aaKnown RBP5.89□□□□□ -1.47
USP3-215ENST00000559771 CPNE5Q9HCH3 593 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 DNAJC28Q9NX36 388 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 RRN3Q9NYV6 651 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 PPARGC1AQ9UBK2 798 aaKnown RBP5.89□□□□□ -1.47
USP3-215ENST00000559771 NOCTQ9UK39 431 aaKnown RBP5.89□□□□□ -1.47
USP3-215ENST00000559771 ZNF462Q96JM2 2506 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 KIF26BQ2KJY2 2108 aa5.89□□□□□ -1.47
USP3-215ENST00000559771 SCN8AQ9UQD0 1980 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 CXorf51AA0A1B0GTR3 108 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 TEX51A0A1B0GUA7 166 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 HMX2A2RU54 273 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 EME2A4GXA9 379 aaPredicted RBP5.88□□□□□ -1.47
USP3-215ENST00000559771 A6NJY4 79 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 CYSRT1A8MQ03 144 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 GOLGA8SH3BPF8 625 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 EPHB6O15197 1021 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 USP12O75317 370 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 GJB6O95452 261 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 FGFR1OPO95684 399 aaKnown RBP5.88□□□□□ -1.47
USP3-215ENST00000559771 F9P00740 461 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 CYP1A1P04798 512 aaPredicted RBP5.88□□□□□ -1.47
USP3-215ENST00000559771 MMEP08473 750 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 ADRA1BP35368 520 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 IGFALSP35858 605 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 MTIF2P46199 727 aaKnown RBP5.88□□□□□ -1.47
USP3-215ENST00000559771 KLK7P49862 253 aa5.88□□□□□ -1.47
USP3-215ENST00000559771 HNRNPKP61978 463 aaKnown RBP eCLIP5.88□□□□□ -1.47
USP3-215ENST00000559771 RPS21P63220 83 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms