RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 ASB12Q8WXK4 309 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 ADAMTS14Q8WXS8 1223 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 RAPGEF5Q92565 580 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 VOPP1Q96AW1 172 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 RNF25Q96BH1 459 aaPredicted RBP8.25□□□□□ -1.09
SNX1-207ENST00000559401 MRFAP1L1Q96HT8 127 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 BMFQ96LC9 184 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 LENG8Q96PV6 779 aaPredicted RBP8.25□□□□□ -1.09
SNX1-207ENST00000559401 NUDCD1Q96RS6 583 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 KLF6Q99612 283 aaPredicted RBP8.25□□□□□ -1.09
SNX1-207ENST00000559401 MAK16Q9BXY0 300 aaKnown RBP8.25□□□□□ -1.09
SNX1-207ENST00000559401 NOD2Q9HC29 1040 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 MBNL1Q9NR56 388 aaKnown RBP8.25□□□□□ -1.09
SNX1-207ENST00000559401 UCKL1Q9NWZ5 548 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 INTUQ9ULD6 942 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 NEUROG3Q9Y4Z2 214 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 PCDHGC4Q9Y5F7 938 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 HEY1Q9Y5J3 304 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 PTPRBP23467 1997 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 SPTY2D1-AS1A0A0U1RR47 76 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 C1QTNF9BB2RNN3 333 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 APOL1O14791 398 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 SOCS5O75159 536 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 PIAS2O75928 621 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 MTA2O94776 668 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 PEX11BO96011 259 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 C1QTNF9P0C862 333 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 DGKAP23743 735 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 HTR1BP28222 390 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 EPHB1P54762 984 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 NAP1L1P55209 391 aaKnown RBP8.24□□□□□ -1.09
SNX1-207ENST00000559401 HNRNPKP61978 463 aaKnown RBP eCLIP8.24□□□□□ -1.09
SNX1-207ENST00000559401 DYNLT1P63172 113 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 TRAF2Q12933 501 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 PTK2BQ14289 1009 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 FZD2Q14332 565 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 ACOX1Q15067 660 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 ST3GAL2Q16842 350 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 ARMC12Q5T9G4 340 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 DHRS13Q6UX07 377 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 UNQ6494/PRO21346Q6UXR6 183 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 LRRC49Q8IUZ0 686 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 RHOT1Q8IXI2 618 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 CCDC170Q8IYT3 715 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 PGBD5Q8N414 524 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 PQLC3Q8N755 202 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 TP53I13Q8NBR0 393 aaPredicted RBP8.24□□□□□ -1.09
SNX1-207ENST00000559401 LMX1AQ8TE12 382 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 CENPTQ96BT3 561 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 ECHDC3Q96DC8 303 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 RNF157Q96PX1 679 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 SEMA3CQ99985 751 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 MGME1Q9BQP7 344 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 POLR1EQ9GZS1 481 aaKnown RBP8.24□□□□□ -1.09
SNX1-207ENST00000559401 CAAP1Q9H8G2 361 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 RBM22Q9NW64 420 aaKnown RBP eCLIP8.24□□□□□ -1.09
SNX1-207ENST00000559401 TOR4AQ9NXH8 423 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 DDX56Q9NY93 547 aaKnown RBP8.24□□□□□ -1.09
SNX1-207ENST00000559401 APOBEC3BQ9UH17 382 aaKnown RBP8.24□□□□□ -1.09
SNX1-207ENST00000559401 TFR2Q9UP52 801 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 MSRB2Q9Y3D2 182 aa8.24□□□□□ -1.09
SNX1-207ENST00000559401 A0A1W2PQ67 120 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 GOLGA6CA6NDK9 693 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 GOLGA6BA6NDN3 693 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 NEMP2A6NFY4 417 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 SOWAHDA6NJG2 315 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 TRIM38O00635 465 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 MATN3O15232 486 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 SIGLEC6O43699 453 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 RFPL3O75679 317 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 RECQL5O94762 991 aaPredicted RBP8.23□□□□□ -1.09
SNX1-207ENST00000559401 CSF2P04141 144 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 GOLGA6DP0CG33 693 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 CYP2A6P11509 494 aaPredicted RBP8.23□□□□□ -1.09
SNX1-207ENST00000559401 KRT10P13645 584 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 CCNB1P14635 433 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 NME1P15531 152 aaKnown RBP8.23□□□□□ -1.09
SNX1-207ENST00000559401 JUNDP17535 347 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 CKMT2P17540 419 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 CTPS1P17812 591 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 CR2P20023 1033 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 COMTP21964 271 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 CA4P22748 312 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 CCNCP24863 283 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 VIPR1P32241 457 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 SLC1A1P43005 524 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 PFN3P60673 137 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 YPEL5P62699 121 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 DSC2Q02487 901 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 AP1B1Q10567 949 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 RALGDSQ12967 914 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 ARHGEF7Q14155 803 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 INPP5AQ14642 412 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 LLGL1Q15334 1064 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 TCEA2Q15560 299 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 WSCD2Q2TBF2 565 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 TPRG1LQ5T0D9 272 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 FAXCQ5TGI0 409 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 NPNTQ6UXI9 565 aa8.23□□□□□ -1.09
SNX1-207ENST00000559401 LIPIQ6XZB0 460 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms