RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 FOXJ1Q92949 421 aa21.81■■□□□ 1.08
SNX1-206ENST00000559389 FEM1CQ96JP0 617 aa21.81■■□□□ 1.08
SNX1-206ENST00000559389 MCCC1Q96RQ3 725 aaPredicted RBP21.81■■□□□ 1.08
SNX1-206ENST00000559389 RAPGEFL1Q9UHV5 662 aa21.81■■□□□ 1.08
SNX1-206ENST00000559389 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.81■■□□□ 1.08
SNX1-206ENST00000559389 PPIL1Q9Y3C6 166 aa21.81■■□□□ 1.08
SNX1-206ENST00000559389 CEP192Q8TEP8 1941 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 TBC1D3DA0A087WVF3 549 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 TBC1D3IA0A087WXS9 549 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 TBC1D3EA0A087X179 549 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 TBC1D3KA0A087X1G2 549 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 TBC1D3FA6NER0 549 aaPredicted RBP21.8■■□□□ 1.08
SNX1-206ENST00000559389 METTL12A8MUP2 240 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 TBC1D3LB9A6J9 549 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 RIOK3O14730 519 aaKnown RBP21.8■■□□□ 1.08
SNX1-206ENST00000559389 IGHV4-34P06331 123 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 TBC1D3HP0C7X1 549 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 ETS1P14921 441 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 ITIH2P19823 946 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 PTGER3P43115 390 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 GRIA4P48058 902 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 CCR5P51681 352 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 LMNB2Q03252 620 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 CDK18Q07002 472 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 RALGDSQ12967 914 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 PRPSAP1Q14558 356 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 TBC1D3GQ6DHY5 549 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 TBC1D3CQ6IPX1 549 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 CCDC137Q6PK04 289 aaKnown RBP21.8■■□□□ 1.08
SNX1-206ENST00000559389 USP45Q70EL2 814 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 DPPA4Q7L190 304 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 PRUNE1Q86TP1 453 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 TBC1D3Q8IZP1 549 aaPredicted RBP21.8■■□□□ 1.08
SNX1-206ENST00000559389 DEFB119Q8N690 84 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 IPMKQ8NFU5 416 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 ATL2Q8NHH9 583 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 BIRC7Q96CA5 298 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 MRGPRX2Q96LB1 330 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 SEMA4AQ9H3S1 761 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 PAK5Q9P286 719 aa21.8■■□□□ 1.08
SNX1-206ENST00000559389 TPX2Q9ULW0 747 aaKnown RBP21.8■■□□□ 1.08
SNX1-206ENST00000559389 AAR2Q9Y312 384 aaKnown RBP21.8■■□□□ 1.08
SNX1-206ENST00000559389 MUC6Q6W4X9 2439 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 CACNA1HO95180 2353 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 CAPN8A6NHC0 703 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 MEI4A8MW99 385 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 NEMP1O14524 444 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 LATO43561 262 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 RNGTTO60942 597 aaKnown RBP21.79■■□□□ 1.08
SNX1-206ENST00000559389 NDST3O95803 873 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 ZSCAN5DPP0CG00 497 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 ACTN2P35609 894 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 NHLH1Q02575 133 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 GALNT3Q14435 633 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 LPAL2Q16609 132 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 TMEM52BQ4KMG9 183 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 TMEM259Q4ZIN3 620 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 FAXCQ5TGI0 409 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 LYSMD4Q5XG99 296 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 KIAA1161Q6NSJ0 714 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 ARMCX6Q7L4S7 300 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 GSTA5Q7RTV2 222 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 HORMAD1Q86X24 394 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 SUMF1Q8NBK3 374 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 ZNF592Q92610 1267 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 ADGRE3Q9BY15 652 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 DDX47Q9H0S4 455 aaKnown RBP21.79■■□□□ 1.08
SNX1-206ENST00000559389 B4GALT6Q9UBX8 382 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 RAB23Q9ULC3 237 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 ZFR2Q9UPR6 939 aaKnown RBP21.79■■□□□ 1.08
SNX1-206ENST00000559389 THADAQ6YHU6 1953 aa21.79■■□□□ 1.08
SNX1-206ENST00000559389 A0A0J9YYE9 177 aa21.78■■□□□ 1.08
SNX1-206ENST00000559389 LOC285095A0A1B0GVY8 99 aa21.78■■□□□ 1.08
SNX1-206ENST00000559389 A0A1W2PQU0 124 aa21.78■■□□□ 1.08
SNX1-206ENST00000559389 NPIPB15A6NHN6 443 aaPredicted RBP21.78■■□□□ 1.08
SNX1-206ENST00000559389 CCDC188H7C350 402 aa21.78■■□□□ 1.08
SNX1-206ENST00000559389 FSBPO95073 299 aa21.78■■□□□ 1.08
SNX1-206ENST00000559389 PCDH8O95206 1070 aa21.78■■□□□ 1.08
SNX1-206ENST00000559389 EPOP01588 193 aa21.78■■□□□ 1.08
SNX1-206ENST00000559389 TRBC1P01850 177 aa21.78■■□□□ 1.08
SNX1-206ENST00000559389 ATXN1LP0C7T5 689 aaKnown RBP21.78■■□□□ 1.08
SNX1-206ENST00000559389 CTPS1P17812 591 aa21.78■■□□□ 1.08
SNX1-206ENST00000559389 NFKBIAP25963 317 aa21.78■■□□□ 1.08
SNX1-206ENST00000559389 RPL22P35268 128 aaKnown RBP21.78■■□□□ 1.08
SNX1-206ENST00000559389 DHPSP49366 369 aaPredicted RBP21.78■■□□□ 1.08
SNX1-206ENST00000559389 EPHB1P54762 984 aa21.78■■□□□ 1.08
SNX1-206ENST00000559389 QPCTQ16769 361 aa21.78■■□□□ 1.08
SNX1-206ENST00000559389 SEL1L3Q68CR1 1132 aa21.78■■□□□ 1.08
SNX1-206ENST00000559389 KCTD11Q693B1 232 aa21.78■■□□□ 1.08
SNX1-206ENST00000559389 NDUFAF2Q8N183 169 aa21.78■■□□□ 1.08
SNX1-206ENST00000559389 IFT43Q96FT9 208 aa21.78■■□□□ 1.08
SNX1-206ENST00000559389 SCRN2Q96FV2 425 aa21.78■■□□□ 1.08
SNX1-206ENST00000559389 LOXL4Q96JB6 756 aa21.78■■□□□ 1.08
SNX1-206ENST00000559389 FSD1LQ9BXM9 530 aa21.78■■□□□ 1.08
SNX1-206ENST00000559389 GOLGA6CA6NDK9 693 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 GOLGA6BA6NDN3 693 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 PROB1E7EW31 1015 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 URI1O94763 535 aaPredicted RBP21.77■■□□□ 1.08
SNX1-206ENST00000559389 ALPIP09923 528 aa21.77■■□□□ 1.08
SNX1-206ENST00000559389 GOLGA6DP0CG33 693 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms