RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 PRAMEF26H0Y7S4 382 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 RIOK3O14730 519 aaKnown RBP13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 VILLO15195 856 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 DDX3YO15523 660 aaKnown RBP13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 TSPAN6O43657 245 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 OPHN1O60890 802 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 PDHA1P08559 390 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 ZFXP17010 805 aaPredicted RBP13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 KCNA4P22459 653 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 HSPA9P38646 679 aaKnown RBP13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 CTSKP43235 329 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 C21orf59P57076 290 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 AP1S1P61966 158 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 TFDP2Q14188 446 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 GRM3Q14832 879 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 CFAP58Q5T655 872 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 TIGD7Q6NT04 549 aaPredicted RBP13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 ZC3H18Q86VM9 953 aaKnown RBP13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 SPATS2Q86XZ4 545 aaKnown RBP13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 ARRDC2Q8TBH0 407 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 ECHDC3Q96DC8 303 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 RBM41Q96IZ5 413 aaKnown RBP13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 BMFQ96LC9 184 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 RTKNQ9BST9 563 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 C1QTNF2Q9BXJ5 285 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 LZTFL1Q9NQ48 299 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 MBNL1Q9NR56 388 aaKnown RBP13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 PCDHB9Q9Y5E1 797 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 FAM208BQ5VWN6 2430 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 CCDC66A2RUB6 948 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 POM121BA6NF01 834 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 TLR4O00206 839 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 GIPC1O14908 333 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 HTRA2O43464 458 aaPredicted RBP13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 CD59P13987 128 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 CTPS1P17812 591 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 RWDD2BP57060 319 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 SGCGQ13326 291 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 PDK1Q15118 436 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 TMEM52BQ4KMG9 183 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 KIAA1161Q6NSJ0 714 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 BRAT1Q6PJG6 821 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 GCNT7Q6ZNI0 430 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 TMEM145Q8NBT3 493 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 CCDC112Q8NEF3 446 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 HCAR2Q8TDS4 363 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 CXorf40AQ8TE69 158 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 CALR3Q96L12 384 aaKnown RBP13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 CAMK1GQ96NX5 476 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 AGAP3Q96P47 875 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 KLF6Q99612 283 aaPredicted RBP13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 IL12RB2Q99665 862 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 OSBPL8Q9BZF1 889 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 DMTF1Q9Y222 760 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 ATP8A1Q9Y2Q0 1164 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 RAI2Q9Y5P3 530 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 USP24Q9UPU5 2620 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 TMEM131Q92545 1883 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 CABIN1Q9Y6J0 2220 aa13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 CNOT1A5YKK6 2376 aaKnown RBP13.92□□□□□ -0.18
TSPAN3-205ENST00000558745 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 F5H423 210 aaPredicted RBP13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 NEBLO76041 1014 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 MMP2P08253 660 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 ALPIP09923 528 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 THEGLP0DJG4 465 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 TGM2P21980 687 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 HNRNPA2B1P22626 353 aaKnown RBP13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 AKT2P31751 481 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 LIG3P49916 1009 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 NXPH1P58417 271 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 RALGDSQ12967 914 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 BNIP3Q12983 259 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 SHBQ15464 509 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 TPRG1LQ5T0D9 272 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 BBS12Q6ZW61 710 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 KDELC2Q7Z4H8 507 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 TXLNBQ8N3L3 684 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 MFSD2AQ8NA29 543 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 DEFB124Q8NES8 71 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 OR13H1Q8NG92 308 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 P3H4Q92791 437 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 COL26A1Q96A83 441 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 KLHDC7BQ96G42 594 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 POLR1EQ9GZS1 481 aaKnown RBP13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 DNAAF2Q9NVR5 837 aaKnown RBP13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 B4GALT6Q9UBX8 382 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 CHKBQ9Y259 395 aa13.91□□□□□ -0.18
TSPAN3-205ENST00000558745 PPP1R12AO14974 1030 aaPredicted RBP13.9□□□□□ -0.18
TSPAN3-205ENST00000558745 SH3BP5O60239 455 aa13.9□□□□□ -0.18
TSPAN3-205ENST00000558745 FZD6O60353 706 aa13.9□□□□□ -0.18
TSPAN3-205ENST00000558745 TM7SF2O76062 418 aa13.9□□□□□ -0.18
TSPAN3-205ENST00000558745 PGLSO95336 258 aa13.9□□□□□ -0.18
TSPAN3-205ENST00000558745 CPP00450 1065 aa13.9□□□□□ -0.18
TSPAN3-205ENST00000558745 ADRB1P08588 477 aa13.9□□□□□ -0.18
TSPAN3-205ENST00000558745 C6P13671 934 aa13.9□□□□□ -0.18
TSPAN3-205ENST00000558745 PTPN3P26045 913 aa13.9□□□□□ -0.18
TSPAN3-205ENST00000558745 MMP12P39900 470 aa13.9□□□□□ -0.18
TSPAN3-205ENST00000558745 CD86P42081 329 aa13.9□□□□□ -0.18
TSPAN3-205ENST00000558745 NR2C2P49116 596 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms