RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 TADA1Q96BN2 335 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 KDM4CQ9H3R0 1056 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 PREBQ9HCU5 417 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 PCDH12Q9NPG4 1184 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 FAM153AQ9UHL3 310 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 RAB23Q9ULC3 237 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 DRG1Q9Y295 367 aaKnown RBP17.56■□□□□ 0.4
TPM1-214ENST00000558544 GON4LQ3T8J9 2241 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 MEI4A8MW99 385 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 NEMP1O14524 444 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 AREL1O15033 823 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 AP1G1O43747 822 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 RNGTTO60942 597 aaKnown RBP17.55■□□□□ 0.4
TPM1-214ENST00000558544 NHLH1Q02575 133 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 GALNT3Q14435 633 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 KCTD19Q17RG1 926 aaPredicted RBP17.55■□□□□ 0.4
TPM1-214ENST00000558544 FAXCQ5TGI0 409 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 KIAA0895LQ68EN5 471 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 ERAP2Q6P179 960 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 KDELC1Q6UW63 502 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 GSTA5Q7RTV2 222 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 GLIS1Q8NBF1 620 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 LPCAT1Q8NF37 534 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 CADM4Q8NFZ8 388 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 PIH1D2Q8WWB5 315 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 SNX19Q92543 992 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 SPOCK2Q92563 424 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 ZNF592Q92610 1267 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 PHTF1Q9UMS5 762 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 SCN8AQ9UQD0 1980 aa17.55■□□□□ 0.4
TPM1-214ENST00000558544 PDE2AO00408 941 aaPredicted RBP17.54■□□□□ 0.4
TPM1-214ENST00000558544 RIOK3O14730 519 aaKnown RBP17.54■□□□□ 0.4
TPM1-214ENST00000558544 METTL18O95568 372 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 PRLP01236 227 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 IGHV4-34P06331 123 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 CTPS1P17812 591 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 MAT2AP31153 395 aaKnown RBP17.54■□□□□ 0.4
TPM1-214ENST00000558544 COILP38432 576 aaPredicted RBP17.54■□□□□ 0.4
TPM1-214ENST00000558544 MMP12P39900 470 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 PAFAH1B1P43034 410 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 SUOXP51687 545 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 EPHB1P54762 984 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 FAM193AP78312 1265 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 ELP6Q0PNE2 266 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 MPP3Q13368 585 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 PRPSAP1Q14558 356 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 SPDYCQ5MJ68 293 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 LYSMD4Q5XG99 296 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 CCDC137Q6PK04 289 aaKnown RBP17.54■□□□□ 0.4
TPM1-214ENST00000558544 SUMF1Q8NBK3 374 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 IPMKQ8NFU5 416 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 FOXJ1Q92949 421 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 BIRC7Q96CA5 298 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 IFT43Q96FT9 208 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 MRGPRX2Q96LB1 330 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 SMIM14Q96QK8 99 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 TRIB3Q96RU7 358 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 WRAP53Q9BUR4 548 aaKnown RBP17.54■□□□□ 0.4
TPM1-214ENST00000558544 MLPHQ9BV36 600 aaPredicted RBP17.54■□□□□ 0.4
TPM1-214ENST00000558544 PCED1AQ9H1Q7 454 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 VPS45Q9NRW7 570 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.54■□□□□ 0.4
TPM1-214ENST00000558544 ATXN2Q99700 1313 aaKnown RBP17.54■□□□□ 0.4
TPM1-214ENST00000558544 PI4KAP42356 2102 aa17.54■□□□□ 0.4
TPM1-214ENST00000558544 A0A1W2PQU0 124 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 METTL12A8MUP2 240 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 A8MX80 341 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 C10orf142B7Z368 130 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 KIF2AO00139 706 aaPredicted RBP17.53■□□□□ 0.4
TPM1-214ENST00000558544 TSPAN6O43657 245 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 ANXA9O76027 345 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 ALPIP09923 528 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 ZSCAN5DPP0CG00 497 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 ACTN2P35609 894 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 GEMP55040 296 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 WNT3AP56704 352 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 CDK18Q07002 472 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 PTPRRQ15256 657 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 SEL1L3Q68CR1 1132 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 TRIM69Q86WT6 500 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 ATL2Q8NHH9 583 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 CXorf40AQ8TE69 158 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 KLK6Q92876 244 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 RMDN1Q96DB5 314 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 PHOX2BQ99453 314 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 DDX47Q9H0S4 455 aaKnown RBP17.53■□□□□ 0.4
TPM1-214ENST00000558544 RNF14Q9UBS8 474 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 B4GALT6Q9UBX8 382 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 ZFR2Q9UPR6 939 aaKnown RBP17.53■□□□□ 0.4
TPM1-214ENST00000558544 WDR87Q6ZQQ6 2873 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 A0A0J9YYE9 177 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 TRBC1P01850 177 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 ITPKAP23677 461 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 MAOBP27338 520 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 GRIA4P48058 902 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 CCR5P51681 352 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 RALGDSQ12967 914 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 QPCTQ16769 361 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 PARP6Q2NL67 630 aa17.53■□□□□ 0.4
TPM1-214ENST00000558544 TMEM52BQ4KMG9 183 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms