RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 A6NHS1 94 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 ZBTB14O43829 449 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 DLX3O60479 287 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 RAMP2O60895 175 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 FGF1P05230 155 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 ITGB1P05556 798 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 CHRNGP07510 517 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 TFEBP19484 476 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 HLA-DPA1P20036 260 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 YWHAQP27348 245 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 ARNTP27540 789 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 GABRB3P28472 473 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 OR1G1P47890 313 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 GLRBP48167 497 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 EPHB1P54762 984 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 NAGLUP54802 743 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 TAS2R39P59534 338 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 FAM189BP81408 668 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 PFKPQ01813 784 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 GALNT1Q10472 559 aaPredicted RBP7.32□□□□□ -1.24
VPS13C-206ENST00000558338 ELAVL2Q12926 359 aaKnown RBP7.32□□□□□ -1.24
VPS13C-206ENST00000558338 CTBP1Q13363 440 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 CYLC2Q14093 348 aaPredicted RBP7.32□□□□□ -1.24
VPS13C-206ENST00000558338 BTG3Q14201 252 aaPredicted RBP7.32□□□□□ -1.24
VPS13C-206ENST00000558338 RFTN1Q14699 578 aaPredicted RBP7.32□□□□□ -1.24
VPS13C-206ENST00000558338 PCSK7Q16549 785 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 SWI5Q1ZZU3 235 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 CTXN3Q4LDR2 81 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 TECRLQ5HYJ1 363 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 MS4A13Q5J8X5 152 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 ARTNQ5T4W7 220 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 ZFP1Q6P2D0 407 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 FRMD7Q6ZUT3 714 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 C14orf80Q86SX3 495 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 ZNF683Q8IZ20 524 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 PGAM4Q8N0Y7 254 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 TMEM151AQ8N4L1 468 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 KYQ8NBH2 561 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 ACVR1CQ8NER5 493 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 SPPL2BQ8TCT7 592 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 C2orf15Q8WU43 125 aaKnown RBP7.32□□□□□ -1.24
VPS13C-206ENST00000558338 FBXO32Q969P5 355 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 FAM136AQ96C01 138 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 NXNL1Q96CM4 212 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 HMCESQ96FZ2 354 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 SPATA17Q96L03 361 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 ZNF599Q96NL3 588 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 GPR78Q96P69 363 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 OR52B2Q96RD2 323 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 ZNF385DQ9H6B1 395 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 SPATS2LQ9NUQ6 558 aaKnown RBP7.32□□□□□ -1.24
VPS13C-206ENST00000558338 MPP6Q9NZW5 540 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 GMIPQ9P107 970 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 STK39Q9UEW8 545 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 RIMKLBQ9ULI2 386 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 GABRQQ9UN88 632 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 WASF2Q9Y6W5 498 aa7.32□□□□□ -1.24
VPS13C-206ENST00000558338 DOCK4Q8N1I0 1966 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 DRGXA6NNA5 263 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 FAM155AB1AL88 458 aaPredicted RBP7.31□□□□□ -1.24
VPS13C-206ENST00000558338 H7C4K7 107 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 GRID2O43424 1007 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 BAG2O95816 211 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 PEX11BO96011 259 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 EPOP01588 193 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 SBK3P0C264 359 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 OR4Q2P0C623 313 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 CKBP12277 381 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 CD46P15529 392 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 GMPRP36959 345 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 PBX3P40426 434 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 CD86P42081 329 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 NUDT2P50583 147 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 PRAMEP78395 509 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 PRKCZQ05513 592 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 ITKQ08881 620 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 NSUN2Q08J23 767 aaKnown RBP eCLIP7.31□□□□□ -1.24
VPS13C-206ENST00000558338 EFEMP1Q12805 493 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 LAPTM4AQ15012 233 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 ACAP2Q15057 778 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 LSM12Q3MHD2 195 aaKnown RBP7.31□□□□□ -1.24
VPS13C-206ENST00000558338 RALGPS1Q5JS13 557 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 CLLU1OSQ5K130 101 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 PRPF38BQ5VTL8 546 aaKnown RBP7.31□□□□□ -1.24
VPS13C-206ENST00000558338 BNC2Q6ZN30 1099 aaPredicted RBP7.31□□□□□ -1.24
VPS13C-206ENST00000558338 ATG14Q6ZNE5 492 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 SNX32Q86XE0 403 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 ZNF354CQ86Y25 554 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 TMEM126BQ8IUX1 230 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 CEP97Q8IW35 865 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 ABI1Q8IZP0 508 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 PHTF2Q8N3S3 785 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.31□□□□□ -1.24
VPS13C-206ENST00000558338 SLC25A41Q8N5S1 370 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 CATSPER1Q8NEC5 780 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 CEP70Q8NHQ1 597 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 MAPK15Q8TD08 544 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 SLC26A7Q8TE54 656 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 HEXDCQ8WVB3 486 aa7.31□□□□□ -1.24
VPS13C-206ENST00000558338 DLG3Q92796 817 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms