RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 PIN4Q9Y237 131 aaKnown RBP10.97□□□□□ -0.65
USP3-206ENST00000558157 RAP2CQ9Y3L5 183 aa10.97□□□□□ -0.65
USP3-206ENST00000558157 FAM172BPA6NC97 362 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 GOLGA8CPA6NN73 597 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 SOCS2O14508 198 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 TRIM24O15164 1050 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 B4GALT4O60513 344 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 DEAF1O75398 565 aaPredicted RBP10.96□□□□□ -0.65
USP3-206ENST00000558157 LRCH4O75427 683 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 TOP3BO95985 862 aaKnown RBP10.96□□□□□ -0.65
USP3-206ENST00000558157 CHRNA1P02708 482 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 NCAM1P13591 858 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 PSMA2P25787 234 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 CDH5P33151 784 aaPredicted RBP10.96□□□□□ -0.65
USP3-206ENST00000558157 OPRL1P41146 370 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 PSME3P61289 254 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 STX5Q13190 355 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 PCBP1Q15365 356 aaKnown RBP eCLIP10.96□□□□□ -0.65
USP3-206ENST00000558157 TRIM71Q2Q1W2 868 aaKnown RBP10.96□□□□□ -0.65
USP3-206ENST00000558157 DCAF4L1Q3SXM0 396 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 CCNYL2Q5T2Q4 361 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 TDRD10Q5VZ19 366 aaKnown RBP10.96□□□□□ -0.65
USP3-206ENST00000558157 SLC9A4Q6AI14 798 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 NOTUMQ6P988 496 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 TRMT10BQ6PF06 316 aaKnown RBP10.96□□□□□ -0.65
USP3-206ENST00000558157 TFAP2DQ7Z6R9 452 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 DCP2Q8IU60 420 aaKnown RBP10.96□□□□□ -0.65
USP3-206ENST00000558157 PARP8Q8N3A8 854 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 KCTD6Q8NC69 237 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 OR5B17Q8NGF7 314 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 MAPK15Q8TD08 544 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 USP33Q8TEY7 942 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 ZNF606Q8WXB4 792 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 ISL2Q96A47 359 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 PPWD1Q96BP3 646 aaKnown RBP10.96□□□□□ -0.65
USP3-206ENST00000558157 HOXD1Q9GZZ0 328 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 SP140LQ9H930 580 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 RPF1Q9H9Y2 349 aaKnown RBP10.96□□□□□ -0.65
USP3-206ENST00000558157 ADA2Q9NZK5 511 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 VPS51Q9UID3 782 aa10.96□□□□□ -0.65
USP3-206ENST00000558157 TCAF2A6NFQ2 919 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 TBKBP1A7MCY6 615 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 DLGAP1O14490 977 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 HLA-DRAP01903 254 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 CHRNB1P11230 501 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 ENDOUP21128 410 aaKnown RBP10.96□□□□□ -0.66
USP3-206ENST00000558157 RCVRNP35243 200 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 GARSP41250 739 aaKnown RBP10.96□□□□□ -0.66
USP3-206ENST00000558157 ZNF132P52740 706 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 LBX1P52954 281 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 TPTEP56180 551 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 IFITM2Q01629 132 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 NIPAL4Q0D2K0 466 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 NME3Q13232 169 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 PDK2Q15119 407 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 SLC27A1Q6PCB7 646 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 AKAP14Q86UN6 197 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 RNF148Q8N7C7 305 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 ZSCAN18Q8TBC5 510 aaPredicted RBP10.96□□□□□ -0.66
USP3-206ENST00000558157 CHAC2Q8WUX2 184 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 ELMO3Q96BJ8 720 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 CLIP3Q96DZ5 547 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 ZNF486Q96H40 463 aaPredicted RBP10.96□□□□□ -0.66
USP3-206ENST00000558157 NAA50Q9GZZ1 169 aaKnown RBP10.96□□□□□ -0.66
USP3-206ENST00000558157 ADAM28Q9UKQ2 775 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 OGDHLQ9ULD0 1010 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 CDYLQ9Y232 598 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 PCDHGA7Q9Y5G6 932 aa10.96□□□□□ -0.66
USP3-206ENST00000558157 TTC34A8MYJ7 566 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 ARVCFO00192 962 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 TRIM13O60858 407 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 C4BPAP04003 597 aaKnown RBP10.95□□□□□ -0.66
USP3-206ENST00000558157 RPLP2P05387 115 aaKnown RBP10.95□□□□□ -0.66
USP3-206ENST00000558157 GNAO1P09471 354 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 FGFR3P22607 806 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 AXLP30530 894 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 CHRNEQ04844 493 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 MAPRE1Q15691 268 aaKnown RBP10.95□□□□□ -0.66
USP3-206ENST00000558157 SAMD4BQ5PRF9 694 aaKnown RBP10.95□□□□□ -0.66
USP3-206ENST00000558157 FBXO46Q6PJ61 603 aaPredicted RBP10.95□□□□□ -0.66
USP3-206ENST00000558157 WDR49Q8IV35 697 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 SLC7A14Q8TBB6 771 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 SLC45A3Q96JT2 553 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 HERC2P3Q9BVR0 1158 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 SPAG4Q9NPE6 437 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 TMEM216Q9P0N5 145 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 RAD54BQ9Y620 910 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 CITO14578 2027 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 BCLAF3A2AJT9 711 aaKnown RBP10.95□□□□□ -0.66
USP3-206ENST00000558157 IDH3BO43837 385 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 VNN1O95497 513 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 APOA4P06727 396 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 APRTP07741 180 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 KRT3P12035 628 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 CKMT2P17540 419 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 MATN1P21941 496 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 CAPGP40121 348 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 GRM5P41594 1212 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 MAGEA12P43365 314 aa10.95□□□□□ -0.66
USP3-206ENST00000558157 RPL14P50914 215 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms