RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 GOLGA6L10A0A0M3HER8 536 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 CFAP69A5D8W1 941 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 C4orf47A7E2U8 309 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 GIPC1O14908 333 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 SOCS5O75159 536 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 ADRB3P13945 408 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 NFKB1P19838 968 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 XPAP23025 273 aaPredicted RBP12.34□□□□□ -0.43
RCCD1-209ENST00000557750 ADPRHP54922 357 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 GDF10P55107 478 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 RPL6Q02878 288 aaKnown RBP12.34□□□□□ -0.43
RCCD1-209ENST00000557750 CREB5Q02930 508 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 TRAF2Q12933 501 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 OASLQ15646 514 aaKnown RBP12.34□□□□□ -0.43
RCCD1-209ENST00000557750 ELF2Q15723 593 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 LRRC73Q5JTD7 316 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 ANKRD20A2Q5SQ80 823 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 PIP5KL1Q5T9C9 394 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 ANKRD20A1Q5TYW2 823 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 AGBL4Q5VU57 503 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 ANKRD20A3Q5VUR7 823 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 ITPRIPL1Q6GPH6 555 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 BRAT1Q6PJG6 821 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 SLC36A4Q6YBV0 504 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 TTC7BQ86TV6 843 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 C11orf74Q86VG3 221 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 PRELID2Q8N945 189 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 CCDC110Q8TBZ0 833 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 SPATA13Q96N96 652 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 RBM15Q96T37 977 aaKnown RBP eCLIP12.34□□□□□ -0.431e-8■■■■■ 27.9
RCCD1-209ENST00000557750 EDEM2Q9BV94 578 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 GPR174Q9BXC1 333 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 SLC25A51Q9H1U9 297 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 SGK2Q9HBY8 427 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 WSB2Q9NYS7 404 aaPredicted RBP12.34□□□□□ -0.43
RCCD1-209ENST00000557750 MBD1Q9UIS9 605 aaPredicted RBP12.34□□□□□ -0.43
RCCD1-209ENST00000557750 RAI2Q9Y5P3 530 aa12.34□□□□□ -0.43
RCCD1-209ENST00000557750 C1QTNF9BB2RNN3 333 aa12.33□□□□□ -0.44
RCCD1-209ENST00000557750 TRAFD1O14545 582 aaPredicted RBP12.33□□□□□ -0.44
RCCD1-209ENST00000557750 SLC7A4O43246 635 aa12.33□□□□□ -0.44
RCCD1-209ENST00000557750 OPHN1O60890 802 aa12.33□□□□□ -0.44
RCCD1-209ENST00000557750 RHOBTB1O94844 696 aa12.33□□□□□ -0.44
RCCD1-209ENST00000557750 SEMA4FO95754 770 aa12.33□□□□□ -0.44
RCCD1-209ENST00000557750 IFNB1P01574 187 aa12.33□□□□□ -0.44
RCCD1-209ENST00000557750 ITGAVP06756 1048 aa12.33□□□□□ -0.44
RCCD1-209ENST00000557750 C1QTNF9P0C862 333 aa12.33□□□□□ -0.44
RCCD1-209ENST00000557750 CA4P22748 312 aa12.33□□□□□ -0.44
RCCD1-209ENST00000557750 STIP1P31948 543 aaKnown RBP12.33□□□□□ -0.44
RCCD1-209ENST00000557750 CD68P34810 354 aaPredicted RBP12.33□□□□□ -0.44
RCCD1-209ENST00000557750 NOVA1P51513 510 aaKnown RBP12.33□□□□□ -0.44
RCCD1-209ENST00000557750 ARMC12Q5T9G4 340 aa12.33□□□□□ -0.44
RCCD1-209ENST00000557750 DRICH1Q6PGQ1 229 aaPredicted RBP12.33□□□□□ -0.44
RCCD1-209ENST00000557750 ARHGEF18Q6ZSZ5 1173 aa12.33□□□□□ -0.44
RCCD1-209ENST00000557750 GSTA5Q7RTV2 222 aa12.33□□□□□ -0.44
RCCD1-209ENST00000557750 DEFB119Q8N690 84 aa12.33□□□□□ -0.44
RCCD1-209ENST00000557750 CCDC89Q8N998 374 aa12.33□□□□□ -0.44
RCCD1-209ENST00000557750 SPATA22Q8NHS9 363 aa12.33□□□□□ -0.44
RCCD1-209ENST00000557750 ZNF592Q92610 1267 aa12.33□□□□□ -0.44
RCCD1-209ENST00000557750 MAGOHBQ96A72 148 aaKnown RBP12.33□□□□□ -0.44
RCCD1-209ENST00000557750 IMP4Q96G21 291 aaKnown RBP12.33□□□□□ -0.44
RCCD1-209ENST00000557750 DKK3Q9UBP4 350 aa12.33□□□□□ -0.44
RCCD1-209ENST00000557750 PCDHB9Q9Y5E1 797 aa12.33□□□□□ -0.44
RCCD1-209ENST00000557750 TBC1D3DA0A087WVF3 549 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 TBC1D3IA0A087WXS9 549 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 TBC1D3EA0A087X179 549 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 TBC1D3KA0A087X1G2 549 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 TBC1D3FA6NER0 549 aaPredicted RBP12.32□□□□□ -0.44
RCCD1-209ENST00000557750 C5orf60A6NFR6 353 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 LRRC72A6NJI9 287 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 TBC1D3LB9A6J9 549 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 NEMP1O14524 444 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 HTRA2O43464 458 aaPredicted RBP12.32□□□□□ -0.44
RCCD1-209ENST00000557750 PLRG1O43660 514 aaKnown RBP12.32□□□□□ -0.44
RCCD1-209ENST00000557750 MT-CYBP00156 380 aaPredicted RBP12.32□□□□□ -0.44
RCCD1-209ENST00000557750 MMP2P08253 660 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 TBC1D3HP0C7X1 549 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 ACTN2P35609 894 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 ABL2P42684 1182 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 PAFAH1B1P43034 410 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 KCNJ1P48048 391 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 POLR2LP62875 67 aaKnown RBP12.32□□□□□ -0.44
RCCD1-209ENST00000557750 SKOR1P84550 965 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 IHHQ14623 411 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 PCSK7Q16549 785 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 UGP2Q16851 508 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 TBC1D3GQ6DHY5 549 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 TBC1D3CQ6IPX1 549 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 UNQ6494/PRO21346Q6UXR6 183 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 LPCAT2Q7L5N7 544 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 PRPF39Q86UA1 669 aaKnown RBP12.32□□□□□ -0.44
RCCD1-209ENST00000557750 ZSWIM9Q86XI8 627 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 CREG2Q8IUH2 290 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 TMEFF1Q8IYR6 380 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 TBC1D3Q8IZP1 549 aaPredicted RBP12.32□□□□□ -0.44
RCCD1-209ENST00000557750 HCAR2Q8TDS4 363 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 RAB7BQ96AH8 199 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 FAM131CQ96AQ9 280 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 ECHDC3Q96DC8 303 aa12.32□□□□□ -0.44
RCCD1-209ENST00000557750 TDRD1Q9BXT4 1180 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms