RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 ATP6V1B1P15313 513 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 PAMP19021 973 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 CTGFP29279 349 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 ZNF135P52742 658 aaPredicted RBP17.82■□□□□ 0.44
XRCC3-218ENST00000557439 PSME3P61289 254 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 PSMD5Q16401 504 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 NRF1Q16656 503 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 BRMS1LQ5PSV4 323 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 HECTD2Q5U5R9 776 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 PIWIL4Q7Z3Z4 852 aaKnown RBP17.82■□□□□ 0.44
XRCC3-218ENST00000557439 PELI3Q8N2H9 469 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 OR52K2Q8NGK3 314 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 PDCD6IPQ8WUM4 868 aaKnown RBP17.82■□□□□ 0.44
XRCC3-218ENST00000557439 FAM192AQ9GZU8 254 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 FGF10O15520 208 aaPredicted RBP17.82■□□□□ 0.44
XRCC3-218ENST00000557439 IPO13O94829 963 aaKnown RBP17.82■□□□□ 0.44
XRCC3-218ENST00000557439 NELFEP18615 380 aaKnown RBP17.82■□□□□ 0.44
XRCC3-218ENST00000557439 POU4F1Q01851 419 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 GRM2Q14416 872 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 CYHR1Q6ZMK1 362 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 C3orf30Q96M34 536 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 CENPKQ9BS16 269 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 ACTL7AQ9Y615 435 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 A0A087X1B8 175 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 SLCO1B7G3V0H7 640 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 BCAS2O75934 225 aaPredicted RBP17.81■□□□□ 0.44
XRCC3-218ENST00000557439 SUPT7LO94864 414 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 MMP2P08253 660 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 SERPINH1P50454 418 aaKnown RBP17.81■□□□□ 0.44
XRCC3-218ENST00000557439 PRKAA2P54646 552 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 PFKPQ01813 784 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 TRIM32Q13049 653 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 FASTKQ14296 549 aaKnown RBP17.81■□□□□ 0.44
XRCC3-218ENST00000557439 FAM83EQ2M2I3 478 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 ZNF280BQ86YH2 543 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 MIB1Q86YT6 1006 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 NMD3Q96D46 503 aaKnown RBP17.81■□□□□ 0.44
XRCC3-218ENST00000557439 PEX1O43933 1283 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 TADA2AO75478 443 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 CAPN15O75808 1086 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 SIX3O95343 332 aaPredicted RBP17.81■□□□□ 0.44
XRCC3-218ENST00000557439 DNAJB2P25686 324 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 MLLT6P55198 1093 aaPredicted RBP17.81■□□□□ 0.44
XRCC3-218ENST00000557439 TSPY1Q01534 308 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 ZNF33AQ06730 810 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 EFEMP1Q12805 493 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 RARS2Q5T160 578 aaKnown RBP17.81■□□□□ 0.44
XRCC3-218ENST00000557439 PGBD5Q8N414 524 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 MYEOVQ96EZ4 313 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 LRCH3Q96II8 777 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.81■□□□□ 0.44
XRCC3-218ENST00000557439 TBC1D30Q9Y2I9 924 aa17.81■□□□□ 0.44
XRCC3-218ENST00000557439 ANKRD12Q6UB98 2062 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 PRSS51A0A1B0GVH4 220 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 TRPC5OSA6NMA1 111 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 ZNF189O75820 626 aaPredicted RBP17.8■□□□□ 0.44
XRCC3-218ENST00000557439 LTA4HP09960 611 aaKnown RBP17.8■□□□□ 0.44
XRCC3-218ENST00000557439 CYP2C18P33260 490 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 XIAPP98170 497 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 MAP3K21Q5TCX8 1036 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 AFMIDQ63HM1 303 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 REP15Q6BDI9 236 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 SETD3Q86TU7 594 aaPredicted RBP17.8■□□□□ 0.44
XRCC3-218ENST00000557439 LZTR1Q8N653 840 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 C2orf69Q8N8R5 385 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 PIP4K2CQ8TBX8 421 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 IGSF8Q969P0 613 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 PTERQ96BW5 349 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 B3GALT6Q96L58 329 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 TBATAQ96M53 351 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 MRPL1Q9BYD6 325 aaKnown RBP17.8■□□□□ 0.44
XRCC3-218ENST00000557439 IL1RL2Q9HB29 575 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 UXTQ9UBK9 157 aaPredicted RBP17.8■□□□□ 0.44
XRCC3-218ENST00000557439 PRORSD1PA6NEY8 169 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 M0QZQ0 153 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 UBDO15205 165 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 CYP11A1P05108 521 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 YBX1P67809 324 aaKnown RBP17.8■□□□□ 0.44
XRCC3-218ENST00000557439 MYBPC1Q00872 1141 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 YWHAHQ04917 246 aaPredicted RBP17.8■□□□□ 0.44
XRCC3-218ENST00000557439 MGAT3Q09327 533 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 MRPL10Q7Z7H8 261 aaKnown RBP17.8■□□□□ 0.44
XRCC3-218ENST00000557439 CILP2Q8IUL8 1156 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 KLHDC9Q8NEP7 349 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 BTBD9Q96Q07 612 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 SH3GL3Q99963 347 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 MTG1Q9BT17 334 aaPredicted RBP17.8■□□□□ 0.44
XRCC3-218ENST00000557439 TRIM8Q9BZR9 551 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 SLC25A51Q9H1U9 297 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 GSTO2Q9H4Y5 243 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 CACNA2D2Q9NY47 1150 aa17.8■□□□□ 0.44
XRCC3-218ENST00000557439 HEATR9A2RTY3 570 aa17.79■□□□□ 0.44
XRCC3-218ENST00000557439 IQCA1LA6NCM1 817 aa17.79■□□□□ 0.44
XRCC3-218ENST00000557439 PSMD12O00232 456 aaPredicted RBP17.79■□□□□ 0.44
XRCC3-218ENST00000557439 GPR182O15218 404 aa17.79■□□□□ 0.44
XRCC3-218ENST00000557439 AKR1A1P14550 325 aa17.79■□□□□ 0.44
XRCC3-218ENST00000557439 TUSC3Q13454 348 aa17.79■□□□□ 0.44
XRCC3-218ENST00000557439 HERC3Q15034 1050 aa17.79■□□□□ 0.44
XRCC3-218ENST00000557439 SIRPB2Q5JXA9 342 aa17.79■□□□□ 0.44
XRCC3-218ENST00000557439 AGAP9Q5VTM2 703 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms