RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 FOXL2NBQ6ZUU3 175 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 MOGAT3Q86VF5 341 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 CREB3L4Q8TEY5 395 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 RAB40AQ8WXH6 277 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 SH3KBP1Q96B97 665 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 OTULINQ96BN8 352 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 FEM1CQ96JP0 617 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 C3orf30Q96M34 536 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 PGLYRP2Q96PD5 576 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 SIX4Q9UIU6 781 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 GDAQ9Y2T3 454 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 ABCA10Q8WWZ4 1543 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 TARBP1Q13395 1621 aaKnown RBP4.24□□□□□ -1.73
VRK1-207ENST00000557352 ABCA5Q8WWZ7 1642 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 NOTCH3Q9UM47 2321 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 PBRM1Q86U86 1689 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 URB2Q14146 1524 aaKnown RBP4.23□□□□□ -1.73
VRK1-207ENST00000557352 C17orf113A0A1B0GUU1 675 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 ANP32CO43423 234 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 ZNF8P17098 575 aaPredicted RBP4.23□□□□□ -1.73
VRK1-207ENST00000557352 ANOS1P23352 680 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 CHKAP35790 457 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 TNFAIP1Q13829 316 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 MORC3Q14149 939 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 ARHGEF6Q15052 776 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 EFNB3Q15768 340 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 EDRF1Q3B7T1 1238 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 AMZ1Q400G9 498 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 PMS2CLQ68D20 193 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 MOB3CQ70IA8 216 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 CPXM2Q8N436 756 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 IL17RCQ8NAC3 791 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 CNOT9Q92600 299 aaKnown RBP4.23□□□□□ -1.73
VRK1-207ENST00000557352 TANKQ92844 425 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 ERGIC1Q969X5 290 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 FAM167BQ9BTA0 163 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.23□□□□□ -1.73
VRK1-207ENST00000557352 STN1Q9H668 368 aaKnown RBP4.23□□□□□ -1.73
VRK1-207ENST00000557352 FEM1BQ9UK73 627 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 SUFUQ9UMX1 484 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 RRP7AQ9Y3A4 280 aaKnown RBP4.23□□□□□ -1.73
VRK1-207ENST00000557352 PCDHGB5Q9Y5G0 923 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 FGD5Q6ZNL6 1462 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 MRC2Q9UBG0 1479 aa4.23□□□□□ -1.73
VRK1-207ENST00000557352 ARHGAP10A1A4S6 786 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 FAM90A7PA6NKC0 464 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 FAM90A22PA8MWA6 464 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 FAM90A12PA8MX19 464 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 FAM90A23PA8MXZ1 464 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 KLRF2D3W0D1 207 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 ZNF587BE7ETH6 402 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 CEP104O60308 925 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 PAK4O96013 591 aaPredicted RBP4.22□□□□□ -1.73
VRK1-207ENST00000557352 CRYAAP02489 173 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 WEE2P0C1S8 567 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 ITGAXP20702 1163 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 BLKP51451 505 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 RUNX2Q13950 521 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 CEP85LQ5SZL2 805 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 ADAM5Q6NVV9 412 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 MARK2Q7KZI7 788 aaKnown RBP4.22□□□□□ -1.73
VRK1-207ENST00000557352 SATL1Q86VE3 508 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 PARP16Q8N5Y8 322 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 MYCT1Q8N699 235 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 KBTBD3Q8NAB2 608 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 GJC3Q8NFK1 279 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 CEP70Q8NHQ1 597 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 SPATA22Q8NHS9 363 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 LNX1Q8TBB1 728 aaPredicted RBP4.22□□□□□ -1.73
VRK1-207ENST00000557352 SPPL3Q8TCT6 385 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 FIG4Q92562 907 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 SNAPC3Q92966 411 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 SLC32A1Q9H598 525 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 LRRC4Q9HBW1 653 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 RASSF1Q9NS23 344 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 CDC14AQ9UNH5 594 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 VDAC3Q9Y277 283 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 RIPOR2Q9Y4F9 1068 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 POLA1P09884 1462 aaPredicted RBP4.22□□□□□ -1.73
VRK1-207ENST00000557352 CTTNBP2Q8WZ74 1663 aa4.22□□□□□ -1.73
VRK1-207ENST00000557352 ATXN2Q99700 1313 aaKnown RBP4.21□□□□□ -1.73
VRK1-207ENST00000557352 A0A0G2JPF8 293 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 A0A0U1RQF3 1178 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 SH2D7A6NKC9 451 aaPredicted RBP4.21□□□□□ -1.74
VRK1-207ENST00000557352 HSPB2A8KAH6 182 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 HNRNPCL3B7ZW38 293 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 PER2O15055 1255 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 MID1O15344 667 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 HNRNPCL1O60812 293 aaKnown RBP4.21□□□□□ -1.74
VRK1-207ENST00000557352 NDUFS7O75251 213 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 TIPRLO75663 272 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 NDUFB4O95168 129 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 HNRNPCL4P0DMR1 293 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 PTPN2P17706 415 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 KCNA5P22460 613 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 HNRNPH1P31943 449 aaKnown RBP4.21□□□□□ -1.74
VRK1-207ENST00000557352 CRIP2P52943 208 aaPredicted RBP4.21□□□□□ -1.74
VRK1-207ENST00000557352 PHEXP78562 749 aa4.21□□□□□ -1.74
VRK1-207ENST00000557352 DMP1Q13316 513 aaPredicted RBP4.21□□□□□ -1.74
VRK1-207ENST00000557352 HSPB2Q16082 182 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms