RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 TFCP2Q12800 502 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 MAPK7Q13164 816 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 SPARCL1Q14515 664 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 KRT72Q14CN4 511 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 PTGISQ16647 500 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 ZACNQ401N2 412 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 KIAA1755Q5JYT7 1200 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 MANEAQ5SRI9 462 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 FAM83BQ5T0W9 1011 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 PDXDC1Q6P996 788 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 DHRS13Q6UX07 377 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.16□□□□□ -1.74
CHD8-212ENST00000557329 RAB11FIP2Q7L804 512 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 BHLHA9Q7RTU4 235 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 ATG9AQ7Z3C6 839 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 FBXO16Q8IX29 292 aaPredicted RBP4.16□□□□□ -1.74
CHD8-212ENST00000557329 ADGRF4Q8IZF3 695 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 OR6J1Q8NGC5 347 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 OR52N4Q8NGI2 321 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 SLC22A17Q8WUG5 538 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 NSMCE1Q8WV22 266 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 NPIPB3Q92617 1050 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 TRMT61AQ96FX7 289 aaKnown RBP4.16□□□□□ -1.74
CHD8-212ENST00000557329 PRR11Q96HE9 360 aaPredicted RBP4.16□□□□□ -1.74
CHD8-212ENST00000557329 ZNF48Q96MX3 618 aaPredicted RBP4.16□□□□□ -1.74
CHD8-212ENST00000557329 NPAS1Q99742 590 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 ABHD14AQ9BUJ0 271 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 GATA5Q9BWX5 397 aaPredicted RBP4.16□□□□□ -1.74
CHD8-212ENST00000557329 SH2D4AQ9H788 454 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 MLXIPQ9HAP2 919 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 MCM9Q9NXL9 1143 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 TNFSF13BQ9Y275 285 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 DDX49Q9Y6V7 483 aaKnown RBP4.16□□□□□ -1.74
CHD8-212ENST00000557329 GRIN2DO15399 1336 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 CHD9Q3L8U1 2897 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 TBC1D3DA0A087WVF3 549 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 TBC1D3IA0A087WXS9 549 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 TBC1D3EA0A087X179 549 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 TBC1D3KA0A087X1G2 549 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 LOC105369274A0A096LPK9 316 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 LY6G6EA0A0G2JKS1 128 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 KIR2DS5A0A0G2JLQ3 304 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 LOC102723532A0A0G2JNH3 316 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 ABHD14A-ACY1A0A1B0GW23 586 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 TBC1D3BA6NDS4 549 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 TBC1D3FA6NER0 549 aaPredicted RBP4.15□□□□□ -1.75
CHD8-212ENST00000557329 GAGE12JA6NER3 117 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 TBC1D3LB9A6J9 549 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 PROB1E7EW31 1015 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 KIR2DS3K7RE56 304 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 SYT5O00445 386 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 VWA5AO00534 786 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 PCDH17O14917 1159 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 PIP5K1BO14986 540 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 PPP6R2O75170 966 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 TBC1D3HP0C7X1 549 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 UBTFL1P0CB47 393 aaPredicted RBP4.15□□□□□ -1.75
CHD8-212ENST00000557329 PRF1P14222 555 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 IDUAP35475 653 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 COPB2P35606 906 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 NBL1P41271 181 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 RABL6Q3YEC7 729 aaPredicted RBP4.15□□□□□ -1.75
CHD8-212ENST00000557329 CCDC158Q5M9N0 1113 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 TBC1D3GQ6DHY5 549 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 TBC1D3CQ6IPX1 549 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 TATDN1Q6P1N9 297 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 NFRKBQ6P4R8 1299 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 ZNF474Q6S9Z5 364 aaPredicted RBP4.15□□□□□ -1.75
CHD8-212ENST00000557329 CHST3Q7LGC8 479 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 TBC1D3Q8IZP1 549 aaPredicted RBP4.15□□□□□ -1.75
CHD8-212ENST00000557329 OR4N4Q8N0Y3 316 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 MMP21Q8N119 569 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 PAQR4Q8N4S7 273 aaPredicted RBP4.15□□□□□ -1.75
CHD8-212ENST00000557329 DCLK2Q8N568 766 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 TMEM105Q8N8V8 129 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 CPT1BQ92523 772 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 VCPIP1Q96JH7 1222 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 WDR83Q9BRX9 315 aaKnown RBP4.15□□□□□ -1.75
CHD8-212ENST00000557329 MTG1Q9BT17 334 aaPredicted RBP4.15□□□□□ -1.75
CHD8-212ENST00000557329 ELOVL1Q9BW60 279 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 KATNAL1Q9BW62 490 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 TMEM120AQ9BXJ8 343 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 WDR12Q9GZL7 423 aaKnown RBP4.15□□□□□ -1.75
CHD8-212ENST00000557329 UPF3AQ9H1J1 476 aaKnown RBP4.15□□□□□ -1.75
CHD8-212ENST00000557329 CCDC134Q9H6E4 229 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 VCPKMTQ9H867 229 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 FZD3Q9NPG1 666 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 TMEM184CQ9NVA4 438 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 NDUFAF4Q9P032 175 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 RIPK3Q9Y572 518 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 R4GN57 208 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 DMDP11532 3685 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 COL4A4P53420 1690 aaPredicted RBP4.15□□□□□ -1.75
CHD8-212ENST00000557329 BRWD1Q9NSI6 2320 aa4.15□□□□□ -1.75
CHD8-212ENST00000557329 ZNF318Q5VUA4 2279 aa4.14□□□□□ -1.75
CHD8-212ENST00000557329 A0A087WV62 115 aa4.14□□□□□ -1.75
CHD8-212ENST00000557329 SLC22A23A1A5C7 686 aa4.14□□□□□ -1.75
CHD8-212ENST00000557329 TMEM247A6NEH6 219 aa4.14□□□□□ -1.75
CHD8-212ENST00000557329 ASB14A6NK59 587 aa4.14□□□□□ -1.75
CHD8-212ENST00000557329 PER2O15055 1255 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms