RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 TMEM248Q9NWD8 314 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 DUS2Q9NX74 493 aaKnown RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 GTSE1Q9NYZ3 720 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 GDE1Q9NZC3 331 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 KIAA1522Q9P206 1035 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 RCOR3Q9P2K3 495 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 PPARGC1AQ9UBK2 798 aaKnown RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 AMACRQ9UHK6 382 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 RALYQ9UKM9 306 aaKnown RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 CYP8B1Q9UNU6 501 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 MRPS17Q9Y2R5 130 aaKnown RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 MTF2Q9Y483 593 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 MYO10Q9HD67 2058 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 GPR179Q6PRD1 2367 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 DENND4AQ7Z401 1863 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 DENND4CQ5VZ89 1909 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ACACBO00763 2458 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ZFHX4Q86UP3 3567 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 OTOGLQ3ZCN5 2332 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ESYT3A0FGR9 886 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ZNF487B1APH4 448 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 H0Y626 953 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 KCNK1O00180 336 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 FGF10O15520 208 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-244ENST00000556898 KCNN4O15554 427 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 GJB3O75712 270 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 LUC7L3O95232 432 aaKnown RBP5.4□□□□□ -1.54
ATXN3-244ENST00000556898 LATS1O95835 1130 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 PEX11BO96011 259 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 PENKP01210 267 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-244ENST00000556898 RHOCP08134 193 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 TYRP14679 529 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 PMLP29590 882 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 OR1E1P30953 314 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ETFBP38117 255 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 LIG3P49916 1009 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 CDH4P55283 916 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 SHC2P98077 582 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 GNA12Q03113 381 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 KDSRQ06136 332 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 GALNT2Q10471 571 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 AP1B1Q10567 949 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 BNIP3Q12983 259 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ZBTB17Q13105 803 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ZNF177Q13360 481 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-244ENST00000556898 LRRC14Q15048 493 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 CSRP2Q16527 193 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 CCNG2Q16589 344 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 GEN1Q17RS7 908 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ERCC6LQ2NKX8 1250 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 MPPE1Q53F39 396 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 RABGAP1LQ5R372 815 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 SYCP2LQ5T4T6 812 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ZNF648Q5T619 568 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-244ENST00000556898 FAXCQ5TGI0 409 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 LAIR1Q6GTX8 287 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 DARS2Q6PI48 645 aaKnown RBP5.4□□□□□ -1.54
ATXN3-244ENST00000556898 TSSK4Q6SA08 328 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 LINGO4Q6UY18 593 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ZNF852Q6ZMS4 543 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 MTSS1LQ765P7 747 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 CHST9Q7L1S5 443 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 VSIG1Q86XK7 387 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 DDX42Q86XP3 938 aaKnown RBP eCLIP5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ZNF354CQ86Y25 554 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 JAMLQ86YT9 394 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 MFN1Q8IWA4 741 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 MFSD6LQ8IWD5 586 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 GSPT2Q8IYD1 628 aaKnown RBP5.4□□□□□ -1.54
ATXN3-244ENST00000556898 MMGT1Q8N4V1 131 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.4□□□□□ -1.54
ATXN3-244ENST00000556898 FAM71DQ8N9W8 422 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 HJURPQ8NCD3 748 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-244ENST00000556898 CCNYQ8ND76 341 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ARHGEF2Q92974 986 aaKnown RBP5.4□□□□□ -1.54
ATXN3-244ENST00000556898 GAL3ST3Q96A11 431 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ELSPBP1Q96BH3 223 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 MRRFQ96E11 262 aaKnown RBP5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ALG14Q96F25 216 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ZNF419Q96HQ0 510 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-244ENST00000556898 LMLNQ96KR4 655 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 CCDC114Q96M63 670 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 NSMCE3Q96MG7 304 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 QKIQ96PU8 341 aaKnown RBP eCLIP5.4□□□□□ -1.54
ATXN3-244ENST00000556898 DDX50Q9BQ39 737 aaKnown RBP5.4□□□□□ -1.54
ATXN3-244ENST00000556898 BBS2Q9BXC9 721 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 TRIM31Q9BZY9 425 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 DPH5Q9H2P9 285 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ECT2Q9H8V3 914 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 KIF9Q9HAQ2 790 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 TRPV4Q9HBA0 871 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 USP29Q9HBJ7 922 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ZDHHC4Q9NPG8 344 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 SPHK2Q9NRA0 654 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 SEMA4GQ9NTN9 838 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 SEPT10Q9P0V9 454 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 RNF14Q9UBS8 474 aa5.4□□□□□ -1.54
ATXN3-244ENST00000556898 INTS6Q9UL03 887 aaKnown RBP5.4□□□□□ -1.54
ATXN3-244ENST00000556898 ZNF148Q9UQR1 794 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms